Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhb9E9Q5G2 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
Pcdhb9E9Q5G2 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhb9E9Q5G2 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhb9E9Q5G2 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhb9E9Q5G2 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhb9E9Q5G2 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhb9E9Q5G2 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhb9E9Q5G2 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Pcdhb9E9Q5G2 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Pcdhb9E9Q5G2 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhb9E9Q5G2 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhb9E9Q5G2 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhb9E9Q5G2 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhb9E9Q5G2 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhb9E9Q5G2 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhb9E9Q5G2 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC19.18■□□□□ 0.66
Pcdhb9E9Q5G2 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhb9E9Q5G2 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhb9E9Q5G2 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhb9E9Q5G2 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhb9E9Q5G2 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhb9E9Q5G2 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhb9E9Q5G2 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC19.18■□□□□ 0.66
Pcdhb9E9Q5G2 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhb9E9Q5G2 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC19.18■□□□□ 0.66
Pcdhb9E9Q5G2 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Pcdhb9E9Q5G2 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhb9E9Q5G2 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhb9E9Q5G2 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhb9E9Q5G2 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhb9E9Q5G2 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC19.18■□□□□ 0.66
Pcdhb9E9Q5G2 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhb9E9Q5G2 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhb9E9Q5G2 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC19.18■□□□□ 0.66
Pcdhb9E9Q5G2 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhb9E9Q5G2 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhb9E9Q5G2 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Pcdhb9E9Q5G2 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhb9E9Q5G2 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhb9E9Q5G2 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhb9E9Q5G2 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhb9E9Q5G2 Gm15165-201ENSMUST00000118140 502 ntBASIC19.17■□□□□ 0.66
Pcdhb9E9Q5G2 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC19.17■□□□□ 0.66
Pcdhb9E9Q5G2 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC19.17■□□□□ 0.66
Pcdhb9E9Q5G2 Gm1818-201ENSMUST00000169406 1184 ntBASIC19.17■□□□□ 0.66
Pcdhb9E9Q5G2 Gm27867-201ENSMUST00000184778 125 ntBASIC19.17■□□□□ 0.66
Pcdhb9E9Q5G2 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC19.17■□□□□ 0.66
Pcdhb9E9Q5G2 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhb9E9Q5G2 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhb9E9Q5G2 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhb9E9Q5G2 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Pcdhb9E9Q5G2 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhb9E9Q5G2 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhb9E9Q5G2 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Pcdhb9E9Q5G2 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Pcdhb9E9Q5G2 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhb9E9Q5G2 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhb9E9Q5G2 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhb9E9Q5G2 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhb9E9Q5G2 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
Pcdhb9E9Q5G2 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
Pcdhb9E9Q5G2 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhb9E9Q5G2 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhb9E9Q5G2 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Pcdhb9E9Q5G2 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhb9E9Q5G2 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhb9E9Q5G2 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhb9E9Q5G2 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Pcdhb9E9Q5G2 AC115863.1-201ENSMUST00000214815 1813 ntBASIC19.16■□□□□ 0.66
Pcdhb9E9Q5G2 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Pcdhb9E9Q5G2 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhb9E9Q5G2 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhb9E9Q5G2 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhb9E9Q5G2 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhb9E9Q5G2 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Pcdhb9E9Q5G2 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhb9E9Q5G2 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhb9E9Q5G2 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhb9E9Q5G2 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Pcdhb9E9Q5G2 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhb9E9Q5G2 Gm7935-201ENSMUST00000100555 1278 ntBASIC19.15■□□□□ 0.66
Pcdhb9E9Q5G2 Gm24589-201ENSMUST00000116692 94 ntBASIC19.15■□□□□ 0.66
Pcdhb9E9Q5G2 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC19.15■□□□□ 0.66
Pcdhb9E9Q5G2 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Pcdhb9E9Q5G2 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhb9E9Q5G2 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhb9E9Q5G2 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhb9E9Q5G2 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhb9E9Q5G2 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhb9E9Q5G2 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhb9E9Q5G2 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhb9E9Q5G2 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhb9E9Q5G2 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhb9E9Q5G2 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhb9E9Q5G2 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhb9E9Q5G2 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhb9E9Q5G2 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhb9E9Q5G2 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC19.15■□□□□ 0.66
Pcdhb9E9Q5G2 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms