Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Herc1E9PZP8 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Herc1E9PZP8 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Herc1E9PZP8 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Herc1E9PZP8 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Herc1E9PZP8 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
Herc1E9PZP8 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Herc1E9PZP8 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Herc1E9PZP8 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Herc1E9PZP8 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Herc1E9PZP8 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Herc1E9PZP8 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC9.13□□□□□ -0.95
Herc1E9PZP8 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC9.13□□□□□ -0.95
Herc1E9PZP8 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Herc1E9PZP8 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
Herc1E9PZP8 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC9.13□□□□□ -0.95
Herc1E9PZP8 Gm18018-201ENSMUST00000198273 408 ntBASIC9.13□□□□□ -0.95
Herc1E9PZP8 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Herc1E9PZP8 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Herc1E9PZP8 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Herc1E9PZP8 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC9.13□□□□□ -0.95
Herc1E9PZP8 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC9.13□□□□□ -0.95
Herc1E9PZP8 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Herc1E9PZP8 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Herc1E9PZP8 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Herc1E9PZP8 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Herc1E9PZP8 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Herc1E9PZP8 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC9.13□□□□□ -0.95
Herc1E9PZP8 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Herc1E9PZP8 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Herc1E9PZP8 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Herc1E9PZP8 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Herc1E9PZP8 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Herc1E9PZP8 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Herc1E9PZP8 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Herc1E9PZP8 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
Herc1E9PZP8 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC9.12□□□□□ -0.95
Herc1E9PZP8 Gm15806-201ENSMUST00000120696 955 ntBASIC9.12□□□□□ -0.95
Herc1E9PZP8 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC9.12□□□□□ -0.95
Herc1E9PZP8 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC9.12□□□□□ -0.95
Herc1E9PZP8 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC9.12□□□□□ -0.95
Herc1E9PZP8 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Herc1E9PZP8 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC9.12□□□□□ -0.95
Herc1E9PZP8 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Herc1E9PZP8 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Herc1E9PZP8 Gm42466-201ENSMUST00000202099 1301 ntBASIC9.12□□□□□ -0.95
Herc1E9PZP8 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC9.12□□□□□ -0.95
Herc1E9PZP8 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
Herc1E9PZP8 AC159747.1-201ENSMUST00000219903 265 ntBASIC9.12□□□□□ -0.95
Herc1E9PZP8 CT009510.1-201ENSMUST00000227972 270 ntBASIC9.12□□□□□ -0.95
Herc1E9PZP8 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Herc1E9PZP8 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Herc1E9PZP8 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Herc1E9PZP8 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Herc1E9PZP8 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Herc1E9PZP8 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC9.12□□□□□ -0.95
Herc1E9PZP8 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Herc1E9PZP8 Gm29541-201ENSMUST00000191351 678 ntBASIC9.12□□□□□ -0.95
Herc1E9PZP8 AC159896.2-201ENSMUST00000214753 269 ntBASIC9.12□□□□□ -0.95
Herc1E9PZP8 AC154319.1-201ENSMUST00000216330 312 ntBASIC9.12□□□□□ -0.95
Herc1E9PZP8 AL589735.1-201ENSMUST00000224353 270 ntBASIC9.12□□□□□ -0.95
Herc1E9PZP8 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Herc1E9PZP8 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Herc1E9PZP8 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Herc1E9PZP8 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Herc1E9PZP8 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Herc1E9PZP8 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Herc1E9PZP8 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Herc1E9PZP8 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
Herc1E9PZP8 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC9.12□□□□□ -0.95
Herc1E9PZP8 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Herc1E9PZP8 Gm12134-201ENSMUST00000122109 520 ntBASIC9.11□□□□□ -0.95
Herc1E9PZP8 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
Herc1E9PZP8 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Herc1E9PZP8 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Herc1E9PZP8 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC9.11□□□□□ -0.95
Herc1E9PZP8 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
Herc1E9PZP8 Gm10478-201ENSMUST00000084451 396 ntBASIC9.11□□□□□ -0.95
Herc1E9PZP8 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Herc1E9PZP8 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Herc1E9PZP8 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
Herc1E9PZP8 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
Herc1E9PZP8 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
Herc1E9PZP8 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Herc1E9PZP8 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Herc1E9PZP8 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
Herc1E9PZP8 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
Herc1E9PZP8 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Herc1E9PZP8 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC9.11□□□□□ -0.95
Herc1E9PZP8 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Herc1E9PZP8 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Herc1E9PZP8 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Herc1E9PZP8 Gm14042-201ENSMUST00000120139 833 ntBASIC9.11□□□□□ -0.95
Herc1E9PZP8 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC9.11□□□□□ -0.95
Herc1E9PZP8 Mir7032-201ENSMUST00000185154 79 ntBASIC9.11□□□□□ -0.95
Herc1E9PZP8 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Herc1E9PZP8 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC9.11□□□□□ -0.95
Herc1E9PZP8 AC131710.1-201ENSMUST00000228336 990 ntBASIC9.11□□□□□ -0.95
Herc1E9PZP8 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Herc1E9PZP8 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC9.11□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms