Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC15.17■□□□□ 0.02
Pcdh17E9PXF0 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Pcdh17E9PXF0 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Pcdh17E9PXF0 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Pcdh17E9PXF0 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh17E9PXF0 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh17E9PXF0 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh17E9PXF0 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Pcdh17E9PXF0 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh17E9PXF0 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh17E9PXF0 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC15.16■□□□□ 0.02
Pcdh17E9PXF0 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh17E9PXF0 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh17E9PXF0 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh17E9PXF0 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh17E9PXF0 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh17E9PXF0 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
Pcdh17E9PXF0 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh17E9PXF0 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh17E9PXF0 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh17E9PXF0 Gm13312-201ENSMUST00000119631 718 ntBASIC15.16■□□□□ 0.02
Pcdh17E9PXF0 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC15.16■□□□□ 0.02
Pcdh17E9PXF0 AC153794.1-201ENSMUST00000169148 126 ntBASIC15.16■□□□□ 0.02
Pcdh17E9PXF0 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Pcdh17E9PXF0 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh17E9PXF0 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh17E9PXF0 Gm44771-201ENSMUST00000206975 626 ntBASIC15.16■□□□□ 0.02
Pcdh17E9PXF0 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh17E9PXF0 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh17E9PXF0 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh17E9PXF0 Gm16499-203ENSMUST00000204633 2177 ntBASIC15.16■□□□□ 0.02
Pcdh17E9PXF0 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Pcdh17E9PXF0 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh17E9PXF0 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh17E9PXF0 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Pcdh17E9PXF0 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh17E9PXF0 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdh17E9PXF0 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Pcdh17E9PXF0 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdh17E9PXF0 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC15.15■□□□□ 0.02
Pcdh17E9PXF0 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdh17E9PXF0 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdh17E9PXF0 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdh17E9PXF0 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC15.15■□□□□ 0.02
Pcdh17E9PXF0 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdh17E9PXF0 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC15.15■□□□□ 0.02
Pcdh17E9PXF0 Gm10052-201ENSMUST00000168019 960 ntBASIC15.15■□□□□ 0.02
Pcdh17E9PXF0 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC15.15■□□□□ 0.02
Pcdh17E9PXF0 Gm7729-201ENSMUST00000050143 801 ntBASIC15.15■□□□□ 0.02
Pcdh17E9PXF0 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdh17E9PXF0 Gm20628-201ENSMUST00000177363 3215 ntBASIC15.15■□□□□ 0.02
Pcdh17E9PXF0 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdh17E9PXF0 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC15.15■□□□□ 0.02
Pcdh17E9PXF0 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdh17E9PXF0 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Pcdh17E9PXF0 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdh17E9PXF0 Gm45203-201ENSMUST00000206384 1831 ntBASIC15.15■□□□□ 0.02
Pcdh17E9PXF0 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdh17E9PXF0 Gm37166-201ENSMUST00000195473 2474 ntBASIC15.15■□□□□ 0.02
Pcdh17E9PXF0 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdh17E9PXF0 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC15.15■□□□□ 0.02
Pcdh17E9PXF0 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdh17E9PXF0 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC15.14■□□□□ 0.01
Pcdh17E9PXF0 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Pcdh17E9PXF0 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC15.14■□□□□ 0.01
Pcdh17E9PXF0 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC15.14■□□□□ 0.01
Pcdh17E9PXF0 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC15.14■□□□□ 0.01
Pcdh17E9PXF0 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdh17E9PXF0 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdh17E9PXF0 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdh17E9PXF0 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdh17E9PXF0 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC15.14■□□□□ 0.01
Pcdh17E9PXF0 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdh17E9PXF0 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdh17E9PXF0 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC15.14■□□□□ 0.01
Pcdh17E9PXF0 Mir8098-201ENSMUST00000184011 137 ntBASIC15.14■□□□□ 0.01
Pcdh17E9PXF0 Gm5864-201ENSMUST00000202263 970 ntBASIC15.14■□□□□ 0.01
Pcdh17E9PXF0 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC15.14■□□□□ 0.01
Pcdh17E9PXF0 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdh17E9PXF0 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdh17E9PXF0 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Pcdh17E9PXF0 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC15.14■□□□□ 0.01
Pcdh17E9PXF0 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdh17E9PXF0 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdh17E9PXF0 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdh17E9PXF0 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdh17E9PXF0 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC15.14■□□□□ 0.01
Pcdh17E9PXF0 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdh17E9PXF0 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdh17E9PXF0 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdh17E9PXF0 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdh17E9PXF0 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Pcdh17E9PXF0 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Pcdh17E9PXF0 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdh17E9PXF0 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdh17E9PXF0 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdh17E9PXF0 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdh17E9PXF0 Gm13884-201ENSMUST00000118103 829 ntBASIC15.13■□□□□ 0.01
Pcdh17E9PXF0 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC15.13■□□□□ 0.01
Pcdh17E9PXF0 Rprl3-201ENSMUST00000157400 290 ntBASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms