Protein–RNA interactions for Protein: D3YXG0

Hmcn1, Hemicentin-1, mousemouse

Predictions only

Length 5,634 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmcn1D3YXG0 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Hmcn1D3YXG0 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
Hmcn1D3YXG0 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC4.7□□□□□ -1.66
Hmcn1D3YXG0 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
Hmcn1D3YXG0 AC124732.1-201ENSMUST00000221551 910 ntBASIC4.7□□□□□ -1.66
Hmcn1D3YXG0 CT030684.1-201ENSMUST00000227292 914 ntBASIC4.7□□□□□ -1.66
Hmcn1D3YXG0 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Hmcn1D3YXG0 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Hmcn1D3YXG0 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Hmcn1D3YXG0 AL590614.2-201ENSMUST00000225374 1937 ntBASIC4.7□□□□□ -1.66
Hmcn1D3YXG0 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
Hmcn1D3YXG0 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Hmcn1D3YXG0 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Hmcn1D3YXG0 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
Hmcn1D3YXG0 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
Hmcn1D3YXG0 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Hmcn1D3YXG0 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Hmcn1D3YXG0 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Hmcn1D3YXG0 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC4.7□□□□□ -1.66
Hmcn1D3YXG0 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC4.7□□□□□ -1.66
Hmcn1D3YXG0 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Hmcn1D3YXG0 Gm12176-201ENSMUST00000121420 875 ntBASIC4.7□□□□□ -1.66
Hmcn1D3YXG0 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC4.7□□□□□ -1.66
Hmcn1D3YXG0 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Hmcn1D3YXG0 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC4.7□□□□□ -1.66
Hmcn1D3YXG0 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Hmcn1D3YXG0 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Hmcn1D3YXG0 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Hmcn1D3YXG0 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Hmcn1D3YXG0 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Hmcn1D3YXG0 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Hmcn1D3YXG0 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
Hmcn1D3YXG0 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Hmcn1D3YXG0 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
Hmcn1D3YXG0 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Hmcn1D3YXG0 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Hmcn1D3YXG0 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Hmcn1D3YXG0 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
Hmcn1D3YXG0 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC4.7□□□□□ -1.66
Hmcn1D3YXG0 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Hmcn1D3YXG0 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Hmcn1D3YXG0 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC4.7□□□□□ -1.66
Hmcn1D3YXG0 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC4.7□□□□□ -1.66
Hmcn1D3YXG0 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
Hmcn1D3YXG0 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Hmcn1D3YXG0 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Hmcn1D3YXG0 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Hmcn1D3YXG0 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Hmcn1D3YXG0 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Hmcn1D3YXG0 Gm43545-201ENSMUST00000196765 2779 ntBASIC4.7□□□□□ -1.66
Hmcn1D3YXG0 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC4.7□□□□□ -1.66
Hmcn1D3YXG0 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Hmcn1D3YXG0 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Hmcn1D3YXG0 AC124751.1-201ENSMUST00000222716 1408 ntBASIC4.69□□□□□ -1.66
Hmcn1D3YXG0 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Hmcn1D3YXG0 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
Hmcn1D3YXG0 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
Hmcn1D3YXG0 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Hmcn1D3YXG0 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC4.69□□□□□ -1.66
Hmcn1D3YXG0 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Hmcn1D3YXG0 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
Hmcn1D3YXG0 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC4.69□□□□□ -1.66
Hmcn1D3YXG0 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Hmcn1D3YXG0 Gpr146-202ENSMUST00000053120 1040 ntBASIC4.69□□□□□ -1.66
Hmcn1D3YXG0 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
Hmcn1D3YXG0 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Hmcn1D3YXG0 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Hmcn1D3YXG0 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Hmcn1D3YXG0 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Hmcn1D3YXG0 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
Hmcn1D3YXG0 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC4.69□□□□□ -1.66
Hmcn1D3YXG0 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC4.69□□□□□ -1.66
Hmcn1D3YXG0 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC4.69□□□□□ -1.66
Hmcn1D3YXG0 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC4.69□□□□□ -1.66
Hmcn1D3YXG0 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC4.69□□□□□ -1.66
Hmcn1D3YXG0 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC4.69□□□□□ -1.66
Hmcn1D3YXG0 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Hmcn1D3YXG0 Ighv5-13-201ENSMUST00000193550 290 ntBASIC4.69□□□□□ -1.66
Hmcn1D3YXG0 Gm45059-201ENSMUST00000205558 1077 ntBASIC4.69□□□□□ -1.66
Hmcn1D3YXG0 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
Hmcn1D3YXG0 Gm9908-201ENSMUST00000211534 448 ntBASIC4.69□□□□□ -1.66
Hmcn1D3YXG0 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
Hmcn1D3YXG0 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
Hmcn1D3YXG0 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Hmcn1D3YXG0 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Hmcn1D3YXG0 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
Hmcn1D3YXG0 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
Hmcn1D3YXG0 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Hmcn1D3YXG0 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
Hmcn1D3YXG0 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Hmcn1D3YXG0 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
Hmcn1D3YXG0 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Hmcn1D3YXG0 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC4.69□□□□□ -1.66
Hmcn1D3YXG0 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC4.69□□□□□ -1.66
Hmcn1D3YXG0 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Hmcn1D3YXG0 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
Hmcn1D3YXG0 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
Hmcn1D3YXG0 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Hmcn1D3YXG0 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Hmcn1D3YXG0 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC4.69□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms