Protein–RNA interactions for Protein: D3YU81

Rfx8, DNA-binding protein RFX8, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx8D3YU81 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Rfx8D3YU81 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rfx8D3YU81 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC17.31■□□□□ 0.36
Rfx8D3YU81 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rfx8D3YU81 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rfx8D3YU81 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC17.31■□□□□ 0.36
Rfx8D3YU81 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rfx8D3YU81 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Rfx8D3YU81 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rfx8D3YU81 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rfx8D3YU81 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rfx8D3YU81 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rfx8D3YU81 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rfx8D3YU81 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rfx8D3YU81 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rfx8D3YU81 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rfx8D3YU81 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rfx8D3YU81 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rfx8D3YU81 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rfx8D3YU81 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC17.31■□□□□ 0.36
Rfx8D3YU81 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rfx8D3YU81 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rfx8D3YU81 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Rfx8D3YU81 Gm8258-201ENSMUST00000055593 1449 ntBASIC17.3■□□□□ 0.36
Rfx8D3YU81 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rfx8D3YU81 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Rfx8D3YU81 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC17.3■□□□□ 0.36
Rfx8D3YU81 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rfx8D3YU81 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Rfx8D3YU81 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Rfx8D3YU81 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Rfx8D3YU81 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rfx8D3YU81 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rfx8D3YU81 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rfx8D3YU81 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Rfx8D3YU81 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Rfx8D3YU81 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rfx8D3YU81 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rfx8D3YU81 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rfx8D3YU81 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rfx8D3YU81 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Rfx8D3YU81 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Rfx8D3YU81 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rfx8D3YU81 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rfx8D3YU81 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rfx8D3YU81 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC17.3■□□□□ 0.36
Rfx8D3YU81 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rfx8D3YU81 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rfx8D3YU81 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rfx8D3YU81 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Rfx8D3YU81 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rfx8D3YU81 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rfx8D3YU81 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rfx8D3YU81 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC17.29■□□□□ 0.36
Rfx8D3YU81 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rfx8D3YU81 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rfx8D3YU81 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC17.29■□□□□ 0.36
Rfx8D3YU81 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC17.29■□□□□ 0.36
Rfx8D3YU81 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rfx8D3YU81 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rfx8D3YU81 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rfx8D3YU81 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC17.29■□□□□ 0.36
Rfx8D3YU81 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC17.29■□□□□ 0.36
Rfx8D3YU81 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC17.29■□□□□ 0.36
Rfx8D3YU81 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rfx8D3YU81 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC17.29■□□□□ 0.36
Rfx8D3YU81 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rfx8D3YU81 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rfx8D3YU81 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rfx8D3YU81 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rfx8D3YU81 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rfx8D3YU81 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rfx8D3YU81 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rfx8D3YU81 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rfx8D3YU81 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rfx8D3YU81 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rfx8D3YU81 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rfx8D3YU81 Mir770-201ENSMUST00000103252 94 ntBASIC17.28■□□□□ 0.36
Rfx8D3YU81 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Rfx8D3YU81 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rfx8D3YU81 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC17.28■□□□□ 0.36
Rfx8D3YU81 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC17.28■□□□□ 0.36
Rfx8D3YU81 Gm6623-201ENSMUST00000173570 544 ntBASIC17.28■□□□□ 0.36
Rfx8D3YU81 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Rfx8D3YU81 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rfx8D3YU81 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rfx8D3YU81 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rfx8D3YU81 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rfx8D3YU81 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rfx8D3YU81 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rfx8D3YU81 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rfx8D3YU81 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Rfx8D3YU81 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Rfx8D3YU81 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Rfx8D3YU81 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rfx8D3YU81 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Rfx8D3YU81 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC17.27■□□□□ 0.36
Rfx8D3YU81 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Rfx8D3YU81 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rfx8D3YU81 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms