Protein–RNA interactions for Protein: B2RVW2

Clrn2, Clarin 2, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn2B2RVW2 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Clrn2B2RVW2 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Clrn2B2RVW2 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Clrn2B2RVW2 Gm36967-201ENSMUST00000193814 266 ntBASIC18.89■□□□□ 0.61
Clrn2B2RVW2 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC18.89■□□□□ 0.61
Clrn2B2RVW2 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC18.89■□□□□ 0.61
Clrn2B2RVW2 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Clrn2B2RVW2 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Clrn2B2RVW2 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Clrn2B2RVW2 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Clrn2B2RVW2 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Clrn2B2RVW2 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Clrn2B2RVW2 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Clrn2B2RVW2 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC18.89■□□□□ 0.61
Clrn2B2RVW2 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Clrn2B2RVW2 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Clrn2B2RVW2 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Clrn2B2RVW2 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Clrn2B2RVW2 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Clrn2B2RVW2 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Clrn2B2RVW2 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Clrn2B2RVW2 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Clrn2B2RVW2 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Clrn2B2RVW2 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Clrn2B2RVW2 Ddx41-204ENSMUST00000224765 2199 ntBASIC18.88■□□□□ 0.61
Clrn2B2RVW2 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
Clrn2B2RVW2 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Clrn2B2RVW2 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Clrn2B2RVW2 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Clrn2B2RVW2 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Clrn2B2RVW2 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
Clrn2B2RVW2 Gm25406-201ENSMUST00000157599 105 ntBASIC18.87■□□□□ 0.61
Clrn2B2RVW2 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC18.87■□□□□ 0.61
Clrn2B2RVW2 Gm6736-201ENSMUST00000166583 948 ntBASIC18.87■□□□□ 0.61
Clrn2B2RVW2 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Clrn2B2RVW2 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Clrn2B2RVW2 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC18.87■□□□□ 0.61
Clrn2B2RVW2 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC18.87■□□□□ 0.61
Clrn2B2RVW2 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Clrn2B2RVW2 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Clrn2B2RVW2 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Clrn2B2RVW2 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Clrn2B2RVW2 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Clrn2B2RVW2 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Clrn2B2RVW2 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Clrn2B2RVW2 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Clrn2B2RVW2 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Clrn2B2RVW2 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Clrn2B2RVW2 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Clrn2B2RVW2 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Clrn2B2RVW2 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Clrn2B2RVW2 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Clrn2B2RVW2 Gm9172-201ENSMUST00000212092 954 ntBASIC18.86■□□□□ 0.61
Clrn2B2RVW2 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Clrn2B2RVW2 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Clrn2B2RVW2 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Clrn2B2RVW2 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Clrn2B2RVW2 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Clrn2B2RVW2 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Clrn2B2RVW2 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.86■□□□□ 0.61
Clrn2B2RVW2 AC122901.1-201ENSMUST00000214203 1790 ntBASIC18.86■□□□□ 0.61
Clrn2B2RVW2 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Clrn2B2RVW2 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Clrn2B2RVW2 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Clrn2B2RVW2 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Clrn2B2RVW2 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC18.85■□□□□ 0.61
Clrn2B2RVW2 AC090659.1-201ENSMUST00000224334 768 ntBASIC18.85■□□□□ 0.61
Clrn2B2RVW2 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Clrn2B2RVW2 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Clrn2B2RVW2 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC18.85■□□□□ 0.61
Clrn2B2RVW2 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Clrn2B2RVW2 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Clrn2B2RVW2 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Clrn2B2RVW2 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Clrn2B2RVW2 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC18.84■□□□□ 0.61
Clrn2B2RVW2 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Clrn2B2RVW2 Gm5837-201ENSMUST00000191844 1369 ntBASIC18.84■□□□□ 0.61
Clrn2B2RVW2 Gm3928-201ENSMUST00000121141 1307 ntBASIC18.84■□□□□ 0.61
Clrn2B2RVW2 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Clrn2B2RVW2 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Clrn2B2RVW2 Gm9727-201ENSMUST00000161387 555 ntBASIC18.84■□□□□ 0.61
Clrn2B2RVW2 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Clrn2B2RVW2 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC18.84■□□□□ 0.61
Clrn2B2RVW2 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Clrn2B2RVW2 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC18.84■□□□□ 0.61
Clrn2B2RVW2 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC18.84■□□□□ 0.61
Clrn2B2RVW2 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Clrn2B2RVW2 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Clrn2B2RVW2 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Clrn2B2RVW2 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Clrn2B2RVW2 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Clrn2B2RVW2 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Clrn2B2RVW2 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Clrn2B2RVW2 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Clrn2B2RVW2 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Clrn2B2RVW2 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Clrn2B2RVW2 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Clrn2B2RVW2 Gm15743-202ENSMUST00000182690 1901 ntBASIC18.83■□□□□ 0.6
Clrn2B2RVW2 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Clrn2B2RVW2 Gm23935-201ENSMUST00000102303 57 ntBASIC18.83■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms