Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scn1aA2APX8 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scn1aA2APX8 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Scn1aA2APX8 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.06■□□□□ 0.32
Scn1aA2APX8 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scn1aA2APX8 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.06■□□□□ 0.32
Scn1aA2APX8 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scn1aA2APX8 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Scn1aA2APX8 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scn1aA2APX8 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scn1aA2APX8 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scn1aA2APX8 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Scn1aA2APX8 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scn1aA2APX8 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scn1aA2APX8 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scn1aA2APX8 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Scn1aA2APX8 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
Scn1aA2APX8 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
Scn1aA2APX8 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Scn1aA2APX8 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Scn1aA2APX8 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Scn1aA2APX8 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Scn1aA2APX8 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC17.05■□□□□ 0.32
Scn1aA2APX8 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC17.05■□□□□ 0.32
Scn1aA2APX8 Gm9172-201ENSMUST00000212092 954 ntBASIC17.05■□□□□ 0.32
Scn1aA2APX8 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Scn1aA2APX8 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC17.05■□□□□ 0.32
Scn1aA2APX8 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Scn1aA2APX8 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Scn1aA2APX8 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Scn1aA2APX8 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Scn1aA2APX8 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Scn1aA2APX8 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.05■□□□□ 0.32
Scn1aA2APX8 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Scn1aA2APX8 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Scn1aA2APX8 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Scn1aA2APX8 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Scn1aA2APX8 Gm5864-201ENSMUST00000202263 970 ntBASIC17.04■□□□□ 0.32
Scn1aA2APX8 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC17.04■□□□□ 0.32
Scn1aA2APX8 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Scn1aA2APX8 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Scn1aA2APX8 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Scn1aA2APX8 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Scn1aA2APX8 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Scn1aA2APX8 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Scn1aA2APX8 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Scn1aA2APX8 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Scn1aA2APX8 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Scn1aA2APX8 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC17.04■□□□□ 0.32
Scn1aA2APX8 Mir5126-201ENSMUST00000175513 77 ntBASIC17.04■□□□□ 0.32
Scn1aA2APX8 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
Scn1aA2APX8 Mzt1-203ENSMUST00000227948 952 ntBASIC17.04■□□□□ 0.32
Scn1aA2APX8 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Scn1aA2APX8 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Scn1aA2APX8 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Scn1aA2APX8 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Scn1aA2APX8 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Scn1aA2APX8 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Scn1aA2APX8 Gm8784-201ENSMUST00000222096 1435 ntBASIC17.04■□□□□ 0.32
Scn1aA2APX8 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC17.03■□□□□ 0.32
Scn1aA2APX8 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Scn1aA2APX8 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.03■□□□□ 0.32
Scn1aA2APX8 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Scn1aA2APX8 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Scn1aA2APX8 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Scn1aA2APX8 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Scn1aA2APX8 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Scn1aA2APX8 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Scn1aA2APX8 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Scn1aA2APX8 Gm11452-201ENSMUST00000122376 690 ntBASIC17.03■□□□□ 0.32
Scn1aA2APX8 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC17.03■□□□□ 0.32
Scn1aA2APX8 Gm28659-201ENSMUST00000188013 759 ntBASIC17.03■□□□□ 0.32
Scn1aA2APX8 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Scn1aA2APX8 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Scn1aA2APX8 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Scn1aA2APX8 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Scn1aA2APX8 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Scn1aA2APX8 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Scn1aA2APX8 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Scn1aA2APX8 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Scn1aA2APX8 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Scn1aA2APX8 AC127349.1-201ENSMUST00000224590 266 ntBASIC17.02■□□□□ 0.32
Scn1aA2APX8 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.02■□□□□ 0.32
Scn1aA2APX8 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Scn1aA2APX8 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Scn1aA2APX8 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Scn1aA2APX8 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Scn1aA2APX8 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Scn1aA2APX8 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Scn1aA2APX8 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Scn1aA2APX8 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Scn1aA2APX8 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Scn1aA2APX8 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Scn1aA2APX8 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Scn1aA2APX8 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Scn1aA2APX8 AC160338.1-201ENSMUST00000214232 705 ntBASIC17.01■□□□□ 0.31
Scn1aA2APX8 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC17.01■□□□□ 0.31
Scn1aA2APX8 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Scn1aA2APX8 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Scn1aA2APX8 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms