Protein–RNA interactions for Protein: A0A0N4SVP8

Gm5580, Predicted pseudogene 5580, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5580A0A0N4SVP8 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC17.82■□□□□ 0.44
Gm5580A0A0N4SVP8 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gm5580A0A0N4SVP8 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gm5580A0A0N4SVP8 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC17.82■□□□□ 0.44
Gm5580A0A0N4SVP8 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Gm5580A0A0N4SVP8 Gm21814-202ENSMUST00000203277 873 ntBASIC17.82■□□□□ 0.44
Gm5580A0A0N4SVP8 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gm5580A0A0N4SVP8 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gm5580A0A0N4SVP8 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
Gm5580A0A0N4SVP8 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gm5580A0A0N4SVP8 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gm5580A0A0N4SVP8 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gm5580A0A0N4SVP8 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Gm5580A0A0N4SVP8 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Gm5580A0A0N4SVP8 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Gm5580A0A0N4SVP8 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Gm5580A0A0N4SVP8 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC17.81■□□□□ 0.44
Gm5580A0A0N4SVP8 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Gm5580A0A0N4SVP8 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC17.81■□□□□ 0.44
Gm5580A0A0N4SVP8 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC17.81■□□□□ 0.44
Gm5580A0A0N4SVP8 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC17.81■□□□□ 0.44
Gm5580A0A0N4SVP8 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Gm5580A0A0N4SVP8 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Gm5580A0A0N4SVP8 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC17.81■□□□□ 0.44
Gm5580A0A0N4SVP8 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Gm5580A0A0N4SVP8 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Gm5580A0A0N4SVP8 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Gm5580A0A0N4SVP8 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC17.81■□□□□ 0.44
Gm5580A0A0N4SVP8 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
Gm5580A0A0N4SVP8 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Gm5580A0A0N4SVP8 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Gm5580A0A0N4SVP8 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC17.81■□□□□ 0.44
Gm5580A0A0N4SVP8 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Gm5580A0A0N4SVP8 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Gm5580A0A0N4SVP8 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
Gm5580A0A0N4SVP8 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm5580A0A0N4SVP8 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm5580A0A0N4SVP8 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Gm5580A0A0N4SVP8 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm5580A0A0N4SVP8 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Gm5580A0A0N4SVP8 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC17.8■□□□□ 0.44
Gm5580A0A0N4SVP8 AC159205.3-201ENSMUST00000224614 874 ntBASIC17.8■□□□□ 0.44
Gm5580A0A0N4SVP8 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Gm5580A0A0N4SVP8 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm5580A0A0N4SVP8 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm5580A0A0N4SVP8 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm5580A0A0N4SVP8 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Gm5580A0A0N4SVP8 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm5580A0A0N4SVP8 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm5580A0A0N4SVP8 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm5580A0A0N4SVP8 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Gm5580A0A0N4SVP8 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC17.79■□□□□ 0.44
Gm5580A0A0N4SVP8 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm5580A0A0N4SVP8 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC17.79■□□□□ 0.44
Gm5580A0A0N4SVP8 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm5580A0A0N4SVP8 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm5580A0A0N4SVP8 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm5580A0A0N4SVP8 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Gm5580A0A0N4SVP8 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC17.79■□□□□ 0.44
Gm5580A0A0N4SVP8 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC17.79■□□□□ 0.44
Gm5580A0A0N4SVP8 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Gm5580A0A0N4SVP8 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm5580A0A0N4SVP8 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm5580A0A0N4SVP8 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Gm5580A0A0N4SVP8 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm5580A0A0N4SVP8 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm5580A0A0N4SVP8 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gm5580A0A0N4SVP8 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gm5580A0A0N4SVP8 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC17.78■□□□□ 0.44
Gm5580A0A0N4SVP8 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gm5580A0A0N4SVP8 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gm5580A0A0N4SVP8 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC17.78■□□□□ 0.44
Gm5580A0A0N4SVP8 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gm5580A0A0N4SVP8 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Gm5580A0A0N4SVP8 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gm5580A0A0N4SVP8 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gm5580A0A0N4SVP8 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gm5580A0A0N4SVP8 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Gm5580A0A0N4SVP8 Prob1-201ENSMUST00000097619 3021 ntBASIC17.78■□□□□ 0.44
Gm5580A0A0N4SVP8 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Gm5580A0A0N4SVP8 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Gm5580A0A0N4SVP8 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Gm5580A0A0N4SVP8 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gm5580A0A0N4SVP8 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC17.78■□□□□ 0.44
Gm5580A0A0N4SVP8 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Gm5580A0A0N4SVP8 Mir5122-201ENSMUST00000175004 89 ntBASIC17.78■□□□□ 0.44
Gm5580A0A0N4SVP8 Gm27463-201ENSMUST00000183569 57 ntBASIC17.78■□□□□ 0.44
Gm5580A0A0N4SVP8 Mir6982-201ENSMUST00000184354 68 ntBASIC17.78■□□□□ 0.44
Gm5580A0A0N4SVP8 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Gm5580A0A0N4SVP8 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gm5580A0A0N4SVP8 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gm5580A0A0N4SVP8 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Gm5580A0A0N4SVP8 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gm5580A0A0N4SVP8 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gm5580A0A0N4SVP8 Zfp264-201ENSMUST00000208656 1563 ntBASIC17.78■□□□□ 0.44
Gm5580A0A0N4SVP8 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gm5580A0A0N4SVP8 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Gm5580A0A0N4SVP8 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gm5580A0A0N4SVP8 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Gm5580A0A0N4SVP8 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms