Protein–RNA interactions for Protein: A0A0G2JG01

Trav13n-4, T cell receptor alpha variable 13N-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-4A0A0G2JG01 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13n-4A0A0G2JG01 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13n-4A0A0G2JG01 Gm7791-201ENSMUST00000219066 539 ntBASIC13.29□□□□□ -0.28
Trav13n-4A0A0G2JG01 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13n-4A0A0G2JG01 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC13.29□□□□□ -0.28
Trav13n-4A0A0G2JG01 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13n-4A0A0G2JG01 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13n-4A0A0G2JG01 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13n-4A0A0G2JG01 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13n-4A0A0G2JG01 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13n-4A0A0G2JG01 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13n-4A0A0G2JG01 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13n-4A0A0G2JG01 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13n-4A0A0G2JG01 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13n-4A0A0G2JG01 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13n-4A0A0G2JG01 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13n-4A0A0G2JG01 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13n-4A0A0G2JG01 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13n-4A0A0G2JG01 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13n-4A0A0G2JG01 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13n-4A0A0G2JG01 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13n-4A0A0G2JG01 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13n-4A0A0G2JG01 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav13n-4A0A0G2JG01 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav13n-4A0A0G2JG01 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav13n-4A0A0G2JG01 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav13n-4A0A0G2JG01 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC13.28□□□□□ -0.28
Trav13n-4A0A0G2JG01 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav13n-4A0A0G2JG01 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav13n-4A0A0G2JG01 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC13.28□□□□□ -0.28
Trav13n-4A0A0G2JG01 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav13n-4A0A0G2JG01 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav13n-4A0A0G2JG01 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav13n-4A0A0G2JG01 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav13n-4A0A0G2JG01 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav13n-4A0A0G2JG01 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC13.28□□□□□ -0.28
Trav13n-4A0A0G2JG01 Gm24841-201ENSMUST00000158676 357 ntBASIC13.28□□□□□ -0.28
Trav13n-4A0A0G2JG01 Ank2-226ENSMUST00000189368 339 ntBASIC13.28□□□□□ -0.28
Trav13n-4A0A0G2JG01 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav13n-4A0A0G2JG01 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Trav13n-4A0A0G2JG01 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav13n-4A0A0G2JG01 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC13.28□□□□□ -0.28
Trav13n-4A0A0G2JG01 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav13n-4A0A0G2JG01 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav13n-4A0A0G2JG01 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav13n-4A0A0G2JG01 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav13n-4A0A0G2JG01 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Trav13n-4A0A0G2JG01 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav13n-4A0A0G2JG01 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav13n-4A0A0G2JG01 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC13.27□□□□□ -0.29
Trav13n-4A0A0G2JG01 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav13n-4A0A0G2JG01 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Trav13n-4A0A0G2JG01 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav13n-4A0A0G2JG01 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav13n-4A0A0G2JG01 AC159205.3-201ENSMUST00000224614 874 ntBASIC13.27□□□□□ -0.29
Trav13n-4A0A0G2JG01 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav13n-4A0A0G2JG01 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav13n-4A0A0G2JG01 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Trav13n-4A0A0G2JG01 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav13n-4A0A0G2JG01 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav13n-4A0A0G2JG01 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC13.27□□□□□ -0.29
Trav13n-4A0A0G2JG01 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav13n-4A0A0G2JG01 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav13n-4A0A0G2JG01 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav13n-4A0A0G2JG01 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav13n-4A0A0G2JG01 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav13n-4A0A0G2JG01 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC13.26□□□□□ -0.29
Trav13n-4A0A0G2JG01 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav13n-4A0A0G2JG01 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav13n-4A0A0G2JG01 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Trav13n-4A0A0G2JG01 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav13n-4A0A0G2JG01 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC13.26□□□□□ -0.29
Trav13n-4A0A0G2JG01 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav13n-4A0A0G2JG01 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav13n-4A0A0G2JG01 Gm21559-201ENSMUST00000220638 855 ntBASIC13.26□□□□□ -0.29
Trav13n-4A0A0G2JG01 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav13n-4A0A0G2JG01 Gm8258-201ENSMUST00000055593 1449 ntBASIC13.26□□□□□ -0.29
Trav13n-4A0A0G2JG01 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav13n-4A0A0G2JG01 Gm8587-201ENSMUST00000076538 843 ntBASIC13.26□□□□□ -0.29
Trav13n-4A0A0G2JG01 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav13n-4A0A0G2JG01 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Trav13n-4A0A0G2JG01 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Trav13n-4A0A0G2JG01 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav13n-4A0A0G2JG01 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
Trav13n-4A0A0G2JG01 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav13n-4A0A0G2JG01 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC13.26□□□□□ -0.29
Trav13n-4A0A0G2JG01 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav13n-4A0A0G2JG01 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav13n-4A0A0G2JG01 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav13n-4A0A0G2JG01 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav13n-4A0A0G2JG01 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC13.25□□□□□ -0.29
Trav13n-4A0A0G2JG01 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav13n-4A0A0G2JG01 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav13n-4A0A0G2JG01 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC13.25□□□□□ -0.29
Trav13n-4A0A0G2JG01 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Trav13n-4A0A0G2JG01 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
Trav13n-4A0A0G2JG01 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC13.25□□□□□ -0.29
Trav13n-4A0A0G2JG01 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav13n-4A0A0G2JG01 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav13n-4A0A0G2JG01 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms