Protein–RNA interactions for Protein: A0A0G2JFS9

Atg4a-ps, Cysteine protease, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4a-psA0A0G2JFS9 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Atg4a-psA0A0G2JFS9 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Atg4a-psA0A0G2JFS9 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Atg4a-psA0A0G2JFS9 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Atg4a-psA0A0G2JFS9 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC19.87■□□□□ 0.77
Atg4a-psA0A0G2JFS9 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Atg4a-psA0A0G2JFS9 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Atg4a-psA0A0G2JFS9 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Atg4a-psA0A0G2JFS9 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Atg4a-psA0A0G2JFS9 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Atg4a-psA0A0G2JFS9 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
Atg4a-psA0A0G2JFS9 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC19.87■□□□□ 0.77
Atg4a-psA0A0G2JFS9 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Atg4a-psA0A0G2JFS9 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Atg4a-psA0A0G2JFS9 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Atg4a-psA0A0G2JFS9 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Atg4a-psA0A0G2JFS9 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Atg4a-psA0A0G2JFS9 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC19.86■□□□□ 0.77
Atg4a-psA0A0G2JFS9 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
Atg4a-psA0A0G2JFS9 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Atg4a-psA0A0G2JFS9 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Atg4a-psA0A0G2JFS9 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Atg4a-psA0A0G2JFS9 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Atg4a-psA0A0G2JFS9 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
Atg4a-psA0A0G2JFS9 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC19.86■□□□□ 0.77
Atg4a-psA0A0G2JFS9 CT009713.7-201ENSMUST00000224689 571 ntBASIC19.86■□□□□ 0.77
Atg4a-psA0A0G2JFS9 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Atg4a-psA0A0G2JFS9 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
Atg4a-psA0A0G2JFS9 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Atg4a-psA0A0G2JFS9 Gm43072-201ENSMUST00000200283 1671 ntBASIC19.86■□□□□ 0.77
Atg4a-psA0A0G2JFS9 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Atg4a-psA0A0G2JFS9 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Atg4a-psA0A0G2JFS9 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Atg4a-psA0A0G2JFS9 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Atg4a-psA0A0G2JFS9 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
Atg4a-psA0A0G2JFS9 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
Atg4a-psA0A0G2JFS9 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Atg4a-psA0A0G2JFS9 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Atg4a-psA0A0G2JFS9 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.85■□□□□ 0.77
Atg4a-psA0A0G2JFS9 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Atg4a-psA0A0G2JFS9 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC19.85■□□□□ 0.77
Atg4a-psA0A0G2JFS9 Gm7977-201ENSMUST00000193787 748 ntBASIC19.85■□□□□ 0.77
Atg4a-psA0A0G2JFS9 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC19.85■□□□□ 0.77
Atg4a-psA0A0G2JFS9 Gm45328-201ENSMUST00000210942 917 ntBASIC19.85■□□□□ 0.77
Atg4a-psA0A0G2JFS9 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Atg4a-psA0A0G2JFS9 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Atg4a-psA0A0G2JFS9 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC19.85■□□□□ 0.77
Atg4a-psA0A0G2JFS9 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Atg4a-psA0A0G2JFS9 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Atg4a-psA0A0G2JFS9 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Atg4a-psA0A0G2JFS9 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Atg4a-psA0A0G2JFS9 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Atg4a-psA0A0G2JFS9 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Atg4a-psA0A0G2JFS9 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Atg4a-psA0A0G2JFS9 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC19.84■□□□□ 0.77
Atg4a-psA0A0G2JFS9 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Atg4a-psA0A0G2JFS9 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Atg4a-psA0A0G2JFS9 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Atg4a-psA0A0G2JFS9 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Atg4a-psA0A0G2JFS9 Olfr129-201ENSMUST00000122318 993 ntBASIC19.84■□□□□ 0.77
Atg4a-psA0A0G2JFS9 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
Atg4a-psA0A0G2JFS9 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Atg4a-psA0A0G2JFS9 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Atg4a-psA0A0G2JFS9 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Atg4a-psA0A0G2JFS9 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Atg4a-psA0A0G2JFS9 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Atg4a-psA0A0G2JFS9 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Atg4a-psA0A0G2JFS9 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Atg4a-psA0A0G2JFS9 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Atg4a-psA0A0G2JFS9 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.77
Atg4a-psA0A0G2JFS9 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
Atg4a-psA0A0G2JFS9 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Atg4a-psA0A0G2JFS9 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Atg4a-psA0A0G2JFS9 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Atg4a-psA0A0G2JFS9 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Atg4a-psA0A0G2JFS9 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Atg4a-psA0A0G2JFS9 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Atg4a-psA0A0G2JFS9 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Atg4a-psA0A0G2JFS9 Gm6858-201ENSMUST00000208582 1468 ntBASIC19.83■□□□□ 0.76
Atg4a-psA0A0G2JFS9 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Atg4a-psA0A0G2JFS9 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Atg4a-psA0A0G2JFS9 AC132265.1-201ENSMUST00000219233 1665 ntBASIC19.83■□□□□ 0.76
Atg4a-psA0A0G2JFS9 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Atg4a-psA0A0G2JFS9 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Atg4a-psA0A0G2JFS9 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Atg4a-psA0A0G2JFS9 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Atg4a-psA0A0G2JFS9 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Atg4a-psA0A0G2JFS9 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Atg4a-psA0A0G2JFS9 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
Atg4a-psA0A0G2JFS9 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Atg4a-psA0A0G2JFS9 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Atg4a-psA0A0G2JFS9 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Atg4a-psA0A0G2JFS9 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Atg4a-psA0A0G2JFS9 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
Atg4a-psA0A0G2JFS9 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC19.82■□□□□ 0.76
Atg4a-psA0A0G2JFS9 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Atg4a-psA0A0G2JFS9 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Atg4a-psA0A0G2JFS9 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Atg4a-psA0A0G2JFS9 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Atg4a-psA0A0G2JFS9 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms