Protein–RNA interactions for Protein: A0A0B4J1F6

BC053393, cDNA sequence BC053393, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BC053393A0A0B4J1F6 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
BC053393A0A0B4J1F6 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
BC053393A0A0B4J1F6 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
BC053393A0A0B4J1F6 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
BC053393A0A0B4J1F6 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
BC053393A0A0B4J1F6 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
BC053393A0A0B4J1F6 Gm24841-201ENSMUST00000158676 357 ntBASIC13.1□□□□□ -0.31
BC053393A0A0B4J1F6 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
BC053393A0A0B4J1F6 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
BC053393A0A0B4J1F6 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
BC053393A0A0B4J1F6 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
BC053393A0A0B4J1F6 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
BC053393A0A0B4J1F6 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
BC053393A0A0B4J1F6 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
BC053393A0A0B4J1F6 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
BC053393A0A0B4J1F6 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
BC053393A0A0B4J1F6 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC13.1□□□□□ -0.31
BC053393A0A0B4J1F6 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
BC053393A0A0B4J1F6 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
BC053393A0A0B4J1F6 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
BC053393A0A0B4J1F6 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC13.1□□□□□ -0.31
BC053393A0A0B4J1F6 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
BC053393A0A0B4J1F6 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
BC053393A0A0B4J1F6 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
BC053393A0A0B4J1F6 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
BC053393A0A0B4J1F6 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
BC053393A0A0B4J1F6 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC13.09□□□□□ -0.31
BC053393A0A0B4J1F6 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC13.09□□□□□ -0.31
BC053393A0A0B4J1F6 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
BC053393A0A0B4J1F6 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
BC053393A0A0B4J1F6 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
BC053393A0A0B4J1F6 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
BC053393A0A0B4J1F6 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC13.09□□□□□ -0.31
BC053393A0A0B4J1F6 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
BC053393A0A0B4J1F6 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
BC053393A0A0B4J1F6 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
BC053393A0A0B4J1F6 Gm44443-201ENSMUST00000204396 5633 ntBASIC13.09□□□□□ -0.31
BC053393A0A0B4J1F6 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
BC053393A0A0B4J1F6 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
BC053393A0A0B4J1F6 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
BC053393A0A0B4J1F6 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
BC053393A0A0B4J1F6 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
BC053393A0A0B4J1F6 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC13.09□□□□□ -0.31
BC053393A0A0B4J1F6 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
BC053393A0A0B4J1F6 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
BC053393A0A0B4J1F6 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
BC053393A0A0B4J1F6 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
BC053393A0A0B4J1F6 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC13.09□□□□□ -0.31
BC053393A0A0B4J1F6 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
BC053393A0A0B4J1F6 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
BC053393A0A0B4J1F6 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
BC053393A0A0B4J1F6 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
BC053393A0A0B4J1F6 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
BC053393A0A0B4J1F6 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
BC053393A0A0B4J1F6 Asic1-205ENSMUST00000228185 1818 ntBASIC13.09□□□□□ -0.31
BC053393A0A0B4J1F6 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
BC053393A0A0B4J1F6 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
BC053393A0A0B4J1F6 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
BC053393A0A0B4J1F6 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
BC053393A0A0B4J1F6 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.31
BC053393A0A0B4J1F6 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
BC053393A0A0B4J1F6 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
BC053393A0A0B4J1F6 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
BC053393A0A0B4J1F6 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC13.08□□□□□ -0.32
BC053393A0A0B4J1F6 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
BC053393A0A0B4J1F6 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
BC053393A0A0B4J1F6 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
BC053393A0A0B4J1F6 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
BC053393A0A0B4J1F6 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
BC053393A0A0B4J1F6 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC13.08□□□□□ -0.32
BC053393A0A0B4J1F6 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
BC053393A0A0B4J1F6 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
BC053393A0A0B4J1F6 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
BC053393A0A0B4J1F6 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
BC053393A0A0B4J1F6 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
BC053393A0A0B4J1F6 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
BC053393A0A0B4J1F6 Gm27011-201ENSMUST00000182352 972 ntBASIC13.08□□□□□ -0.32
BC053393A0A0B4J1F6 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC13.08□□□□□ -0.32
BC053393A0A0B4J1F6 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC13.08□□□□□ -0.32
BC053393A0A0B4J1F6 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC13.08□□□□□ -0.32
BC053393A0A0B4J1F6 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
BC053393A0A0B4J1F6 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
BC053393A0A0B4J1F6 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC13.08□□□□□ -0.32
BC053393A0A0B4J1F6 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
BC053393A0A0B4J1F6 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
BC053393A0A0B4J1F6 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
BC053393A0A0B4J1F6 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
BC053393A0A0B4J1F6 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
BC053393A0A0B4J1F6 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
BC053393A0A0B4J1F6 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
BC053393A0A0B4J1F6 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
BC053393A0A0B4J1F6 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
BC053393A0A0B4J1F6 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
BC053393A0A0B4J1F6 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
BC053393A0A0B4J1F6 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
BC053393A0A0B4J1F6 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
BC053393A0A0B4J1F6 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
BC053393A0A0B4J1F6 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
BC053393A0A0B4J1F6 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
BC053393A0A0B4J1F6 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms