Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC13.4□□□□□ -0.26
Trav18A0A075B656 Arhgef33-211ENSMUST00000225658 473 ntBASIC13.4□□□□□ -0.26
Trav18A0A075B656 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav18A0A075B656 Gm10812-201ENSMUST00000099864 546 ntBASIC13.4□□□□□ -0.26
Trav18A0A075B656 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav18A0A075B656 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav18A0A075B656 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav18A0A075B656 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav18A0A075B656 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav18A0A075B656 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav18A0A075B656 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav18A0A075B656 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav18A0A075B656 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav18A0A075B656 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav18A0A075B656 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav18A0A075B656 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav18A0A075B656 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav18A0A075B656 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav18A0A075B656 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
Trav18A0A075B656 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav18A0A075B656 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav18A0A075B656 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav18A0A075B656 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC13.39□□□□□ -0.27
Trav18A0A075B656 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav18A0A075B656 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav18A0A075B656 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav18A0A075B656 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC13.39□□□□□ -0.27
Trav18A0A075B656 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav18A0A075B656 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC13.39□□□□□ -0.27
Trav18A0A075B656 AC135963.1-201ENSMUST00000211640 717 ntBASIC13.39□□□□□ -0.27
Trav18A0A075B656 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav18A0A075B656 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav18A0A075B656 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC13.39□□□□□ -0.27
Trav18A0A075B656 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav18A0A075B656 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav18A0A075B656 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav18A0A075B656 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav18A0A075B656 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav18A0A075B656 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC13.39□□□□□ -0.27
Trav18A0A075B656 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC13.39□□□□□ -0.27
Trav18A0A075B656 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav18A0A075B656 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav18A0A075B656 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Trav18A0A075B656 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav18A0A075B656 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav18A0A075B656 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Trav18A0A075B656 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav18A0A075B656 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav18A0A075B656 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav18A0A075B656 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav18A0A075B656 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav18A0A075B656 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav18A0A075B656 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC13.38□□□□□ -0.27
Trav18A0A075B656 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC13.38□□□□□ -0.27
Trav18A0A075B656 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav18A0A075B656 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav18A0A075B656 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC13.38□□□□□ -0.27
Trav18A0A075B656 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav18A0A075B656 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav18A0A075B656 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Trav18A0A075B656 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav18A0A075B656 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav18A0A075B656 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav18A0A075B656 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav18A0A075B656 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC13.38□□□□□ -0.27
Trav18A0A075B656 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC13.38□□□□□ -0.27
Trav18A0A075B656 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav18A0A075B656 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav18A0A075B656 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav18A0A075B656 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav18A0A075B656 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Trav18A0A075B656 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav18A0A075B656 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav18A0A075B656 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Trav18A0A075B656 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav18A0A075B656 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav18A0A075B656 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav18A0A075B656 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav18A0A075B656 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav18A0A075B656 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav18A0A075B656 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav18A0A075B656 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav18A0A075B656 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC13.37□□□□□ -0.27
Trav18A0A075B656 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Trav18A0A075B656 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav18A0A075B656 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav18A0A075B656 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav18A0A075B656 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav18A0A075B656 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav18A0A075B656 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav18A0A075B656 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC13.37□□□□□ -0.27
Trav18A0A075B656 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav18A0A075B656 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC13.37□□□□□ -0.27
Trav18A0A075B656 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC13.37□□□□□ -0.27
Trav18A0A075B656 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Trav18A0A075B656 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav18A0A075B656 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav18A0A075B656 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC13.37□□□□□ -0.27
Trav18A0A075B656 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav18A0A075B656 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms