Protein–RNA interactions for Protein: A0A075B644

Trav13-1, T cell receptor alpha variable 13-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-1A0A075B644 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav13-1A0A075B644 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav13-1A0A075B644 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav13-1A0A075B644 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav13-1A0A075B644 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Trav13-1A0A075B644 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav13-1A0A075B644 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav13-1A0A075B644 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC11.65□□□□□ -0.54
Trav13-1A0A075B644 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Trav13-1A0A075B644 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Trav13-1A0A075B644 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav13-1A0A075B644 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Trav13-1A0A075B644 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav13-1A0A075B644 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav13-1A0A075B644 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav13-1A0A075B644 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav13-1A0A075B644 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC11.65□□□□□ -0.55
Trav13-1A0A075B644 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trav13-1A0A075B644 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trav13-1A0A075B644 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trav13-1A0A075B644 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trav13-1A0A075B644 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav13-1A0A075B644 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav13-1A0A075B644 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav13-1A0A075B644 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav13-1A0A075B644 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav13-1A0A075B644 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav13-1A0A075B644 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav13-1A0A075B644 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav13-1A0A075B644 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav13-1A0A075B644 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav13-1A0A075B644 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav13-1A0A075B644 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav13-1A0A075B644 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
Trav13-1A0A075B644 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC11.64□□□□□ -0.55
Trav13-1A0A075B644 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Trav13-1A0A075B644 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav13-1A0A075B644 AC154471.1-201ENSMUST00000224418 436 ntBASIC11.64□□□□□ -0.55
Trav13-1A0A075B644 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Trav13-1A0A075B644 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav13-1A0A075B644 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Trav13-1A0A075B644 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav13-1A0A075B644 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Trav13-1A0A075B644 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav13-1A0A075B644 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav13-1A0A075B644 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Trav13-1A0A075B644 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav13-1A0A075B644 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Trav13-1A0A075B644 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav13-1A0A075B644 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC11.64□□□□□ -0.55
Trav13-1A0A075B644 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav13-1A0A075B644 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav13-1A0A075B644 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav13-1A0A075B644 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav13-1A0A075B644 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav13-1A0A075B644 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav13-1A0A075B644 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav13-1A0A075B644 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13-1A0A075B644 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC11.63□□□□□ -0.55
Trav13-1A0A075B644 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13-1A0A075B644 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13-1A0A075B644 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13-1A0A075B644 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13-1A0A075B644 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13-1A0A075B644 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13-1A0A075B644 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13-1A0A075B644 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13-1A0A075B644 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13-1A0A075B644 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13-1A0A075B644 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13-1A0A075B644 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Trav13-1A0A075B644 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13-1A0A075B644 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13-1A0A075B644 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13-1A0A075B644 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13-1A0A075B644 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13-1A0A075B644 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Trav13-1A0A075B644 Gm11336-201ENSMUST00000118168 334 ntBASIC11.63□□□□□ -0.55
Trav13-1A0A075B644 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13-1A0A075B644 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC11.63□□□□□ -0.55
Trav13-1A0A075B644 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC11.63□□□□□ -0.55
Trav13-1A0A075B644 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Trav13-1A0A075B644 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC11.63□□□□□ -0.55
Trav13-1A0A075B644 AC130713.1-201ENSMUST00000228853 1096 ntBASIC11.63□□□□□ -0.55
Trav13-1A0A075B644 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13-1A0A075B644 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13-1A0A075B644 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13-1A0A075B644 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13-1A0A075B644 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13-1A0A075B644 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13-1A0A075B644 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13-1A0A075B644 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13-1A0A075B644 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13-1A0A075B644 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13-1A0A075B644 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Trav13-1A0A075B644 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13-1A0A075B644 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13-1A0A075B644 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13-1A0A075B644 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13-1A0A075B644 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms