Protein–RNA interactions for Protein: A0A075B633

Trav8n-2, T cell receptor alpha variable 8n-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8n-2A0A075B633 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav8n-2A0A075B633 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav8n-2A0A075B633 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav8n-2A0A075B633 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
Trav8n-2A0A075B633 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trav8n-2A0A075B633 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
Trav8n-2A0A075B633 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC14.94□□□□□ -0.02
Trav8n-2A0A075B633 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
Trav8n-2A0A075B633 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC14.94□□□□□ -0.02
Trav8n-2A0A075B633 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC14.94□□□□□ -0.02
Trav8n-2A0A075B633 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
Trav8n-2A0A075B633 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav8n-2A0A075B633 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav8n-2A0A075B633 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC14.94□□□□□ -0.02
Trav8n-2A0A075B633 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trav8n-2A0A075B633 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trav8n-2A0A075B633 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
Trav8n-2A0A075B633 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trav8n-2A0A075B633 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav8n-2A0A075B633 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trav8n-2A0A075B633 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC14.94□□□□□ -0.02
Trav8n-2A0A075B633 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trav8n-2A0A075B633 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC14.94□□□□□ -0.02
Trav8n-2A0A075B633 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav8n-2A0A075B633 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav8n-2A0A075B633 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav8n-2A0A075B633 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav8n-2A0A075B633 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
Trav8n-2A0A075B633 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav8n-2A0A075B633 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav8n-2A0A075B633 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC14.93□□□□□ -0.02
Trav8n-2A0A075B633 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Trav8n-2A0A075B633 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav8n-2A0A075B633 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav8n-2A0A075B633 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC14.93□□□□□ -0.02
Trav8n-2A0A075B633 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC14.93□□□□□ -0.02
Trav8n-2A0A075B633 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav8n-2A0A075B633 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Trav8n-2A0A075B633 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trav8n-2A0A075B633 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trav8n-2A0A075B633 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC14.93□□□□□ -0.02
Trav8n-2A0A075B633 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC14.93□□□□□ -0.02
Trav8n-2A0A075B633 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trav8n-2A0A075B633 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trav8n-2A0A075B633 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav8n-2A0A075B633 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Trav8n-2A0A075B633 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav8n-2A0A075B633 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC14.93□□□□□ -0.02
Trav8n-2A0A075B633 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav8n-2A0A075B633 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Trav8n-2A0A075B633 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Trav8n-2A0A075B633 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC14.93□□□□□ -0.02
Trav8n-2A0A075B633 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Trav8n-2A0A075B633 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav8n-2A0A075B633 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav8n-2A0A075B633 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC14.92□□□□□ -0.02
Trav8n-2A0A075B633 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav8n-2A0A075B633 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Trav8n-2A0A075B633 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav8n-2A0A075B633 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav8n-2A0A075B633 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav8n-2A0A075B633 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav8n-2A0A075B633 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Trav8n-2A0A075B633 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav8n-2A0A075B633 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC14.92□□□□□ -0.02
Trav8n-2A0A075B633 Gm13036-201ENSMUST00000117799 748 ntBASIC14.92□□□□□ -0.02
Trav8n-2A0A075B633 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
Trav8n-2A0A075B633 Gm11780-201ENSMUST00000136880 516 ntBASIC14.92□□□□□ -0.02
Trav8n-2A0A075B633 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC14.92□□□□□ -0.02
Trav8n-2A0A075B633 Gm9727-201ENSMUST00000161387 555 ntBASIC14.92□□□□□ -0.02
Trav8n-2A0A075B633 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC14.92□□□□□ -0.02
Trav8n-2A0A075B633 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC14.92□□□□□ -0.02
Trav8n-2A0A075B633 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav8n-2A0A075B633 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC14.92□□□□□ -0.02
Trav8n-2A0A075B633 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav8n-2A0A075B633 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav8n-2A0A075B633 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Trav8n-2A0A075B633 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav8n-2A0A075B633 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav8n-2A0A075B633 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav8n-2A0A075B633 Gm3928-201ENSMUST00000121141 1307 ntBASIC14.92□□□□□ -0.02
Trav8n-2A0A075B633 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC14.91□□□□□ -0.02
Trav8n-2A0A075B633 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trav8n-2A0A075B633 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav8n-2A0A075B633 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav8n-2A0A075B633 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC14.91□□□□□ -0.02
Trav8n-2A0A075B633 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trav8n-2A0A075B633 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trav8n-2A0A075B633 Gm25406-201ENSMUST00000157599 105 ntBASIC14.91□□□□□ -0.02
Trav8n-2A0A075B633 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
Trav8n-2A0A075B633 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC14.91□□□□□ -0.02
Trav8n-2A0A075B633 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav8n-2A0A075B633 Gm27397-201ENSMUST00000184997 107 ntBASIC14.91□□□□□ -0.02
Trav8n-2A0A075B633 Gm43575-201ENSMUST00000196420 516 ntBASIC14.91□□□□□ -0.02
Trav8n-2A0A075B633 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trav8n-2A0A075B633 Gm45683-201ENSMUST00000210825 1247 ntBASIC14.91□□□□□ -0.02
Trav8n-2A0A075B633 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trav8n-2A0A075B633 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav8n-2A0A075B633 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC14.91□□□□□ -0.02
Trav8n-2A0A075B633 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms