Protein–RNA interactions for Protein: A0A075B5Z7

Trav5-1, T cell receptor alpha variable 5-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-1A0A075B5Z7 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav5-1A0A075B5Z7 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC14.02□□□□□ -0.17
Trav5-1A0A075B5Z7 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC14.02□□□□□ -0.17
Trav5-1A0A075B5Z7 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC14.02□□□□□ -0.17
Trav5-1A0A075B5Z7 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC14.02□□□□□ -0.17
Trav5-1A0A075B5Z7 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC14.02□□□□□ -0.17
Trav5-1A0A075B5Z7 Umpk-ps-201ENSMUST00000211897 827 ntBASIC14.02□□□□□ -0.17
Trav5-1A0A075B5Z7 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC14.02□□□□□ -0.17
Trav5-1A0A075B5Z7 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav5-1A0A075B5Z7 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav5-1A0A075B5Z7 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trav5-1A0A075B5Z7 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav5-1A0A075B5Z7 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav5-1A0A075B5Z7 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Trav5-1A0A075B5Z7 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav5-1A0A075B5Z7 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav5-1A0A075B5Z7 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Trav5-1A0A075B5Z7 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav5-1A0A075B5Z7 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav5-1A0A075B5Z7 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC14.01□□□□□ -0.17
Trav5-1A0A075B5Z7 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Trav5-1A0A075B5Z7 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC14.01□□□□□ -0.17
Trav5-1A0A075B5Z7 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
Trav5-1A0A075B5Z7 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav5-1A0A075B5Z7 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Trav5-1A0A075B5Z7 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav5-1A0A075B5Z7 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav5-1A0A075B5Z7 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav5-1A0A075B5Z7 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC14.01□□□□□ -0.17
Trav5-1A0A075B5Z7 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav5-1A0A075B5Z7 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav5-1A0A075B5Z7 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Trav5-1A0A075B5Z7 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav5-1A0A075B5Z7 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Trav5-1A0A075B5Z7 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav5-1A0A075B5Z7 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav5-1A0A075B5Z7 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav5-1A0A075B5Z7 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Trav5-1A0A075B5Z7 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav5-1A0A075B5Z7 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav5-1A0A075B5Z7 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trav5-1A0A075B5Z7 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav5-1A0A075B5Z7 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Trav5-1A0A075B5Z7 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav5-1A0A075B5Z7 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Trav5-1A0A075B5Z7 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trav5-1A0A075B5Z7 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav5-1A0A075B5Z7 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trav5-1A0A075B5Z7 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trav5-1A0A075B5Z7 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC14□□□□□ -0.17
Trav5-1A0A075B5Z7 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC14□□□□□ -0.17
Trav5-1A0A075B5Z7 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trav5-1A0A075B5Z7 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav5-1A0A075B5Z7 Gm27741-201ENSMUST00000185060 237 ntBASIC14□□□□□ -0.17
Trav5-1A0A075B5Z7 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav5-1A0A075B5Z7 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Trav5-1A0A075B5Z7 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav5-1A0A075B5Z7 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav5-1A0A075B5Z7 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC14□□□□□ -0.17
Trav5-1A0A075B5Z7 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav5-1A0A075B5Z7 Gm9889-202ENSMUST00000206983 1577 ntBASIC14□□□□□ -0.17
Trav5-1A0A075B5Z7 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trav5-1A0A075B5Z7 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Trav5-1A0A075B5Z7 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC14□□□□□ -0.17
Trav5-1A0A075B5Z7 Gm36858-201ENSMUST00000194501 2391 ntBASIC14□□□□□ -0.17
Trav5-1A0A075B5Z7 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trav5-1A0A075B5Z7 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav5-1A0A075B5Z7 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav5-1A0A075B5Z7 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav5-1A0A075B5Z7 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav5-1A0A075B5Z7 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav5-1A0A075B5Z7 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Trav5-1A0A075B5Z7 Gm13216-201ENSMUST00000117145 591 ntBASIC13.99□□□□□ -0.17
Trav5-1A0A075B5Z7 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav5-1A0A075B5Z7 Gm15165-201ENSMUST00000118140 502 ntBASIC13.99□□□□□ -0.17
Trav5-1A0A075B5Z7 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC13.99□□□□□ -0.17
Trav5-1A0A075B5Z7 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC13.99□□□□□ -0.17
Trav5-1A0A075B5Z7 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trav5-1A0A075B5Z7 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC13.99□□□□□ -0.17
Trav5-1A0A075B5Z7 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav5-1A0A075B5Z7 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC13.99□□□□□ -0.17
Trav5-1A0A075B5Z7 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav5-1A0A075B5Z7 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav5-1A0A075B5Z7 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav5-1A0A075B5Z7 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
Trav5-1A0A075B5Z7 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav5-1A0A075B5Z7 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav5-1A0A075B5Z7 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav5-1A0A075B5Z7 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav5-1A0A075B5Z7 Gm15635-204ENSMUST00000208024 2539 ntBASIC13.99□□□□□ -0.17
Trav5-1A0A075B5Z7 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trav5-1A0A075B5Z7 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav5-1A0A075B5Z7 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Trav5-1A0A075B5Z7 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC13.99□□□□□ -0.17
Trav5-1A0A075B5Z7 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav5-1A0A075B5Z7 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC13.98□□□□□ -0.17
Trav5-1A0A075B5Z7 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav5-1A0A075B5Z7 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC13.98□□□□□ -0.17
Trav5-1A0A075B5Z7 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
Trav5-1A0A075B5Z7 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms