Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.15□□□□□ -1.75
AMBRA1Q9C0C7 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.15□□□□□ -1.75
AMBRA1Q9C0C7 AL356585.4-201ENST00000623078 1229 ntBASIC4.15□□□□□ -1.75
AMBRA1Q9C0C7 AP003122.6-201ENST00000623831 495 ntBASIC4.15□□□□□ -1.75
AMBRA1Q9C0C7 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.15□□□□□ -1.75
AMBRA1Q9C0C7 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
AMBRA1Q9C0C7 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
AMBRA1Q9C0C7 ZNF137P-201ENST00000456718 1920 ntBASIC4.15□□□□□ -1.75
AMBRA1Q9C0C7 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
AMBRA1Q9C0C7 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
AMBRA1Q9C0C7 AC108467.2-201ENST00000617640 1597 ntBASIC4.14□□□□□ -1.75
AMBRA1Q9C0C7 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
AMBRA1Q9C0C7 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.14□□□□□ -1.75
AMBRA1Q9C0C7 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.14□□□□□ -1.75
AMBRA1Q9C0C7 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.14□□□□□ -1.75
AMBRA1Q9C0C7 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
AMBRA1Q9C0C7 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
AMBRA1Q9C0C7 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.14□□□□□ -1.75
AMBRA1Q9C0C7 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
AMBRA1Q9C0C7 SNORD56.2-201ENST00000363242 71 ntBASIC4.14□□□□□ -1.75
AMBRA1Q9C0C7 Y_RNA.160-201ENST00000363677 92 ntBASIC4.14□□□□□ -1.75
AMBRA1Q9C0C7 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
AMBRA1Q9C0C7 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC4.14□□□□□ -1.75
AMBRA1Q9C0C7 MIR23B-201ENST00000384832 97 ntBASIC4.14□□□□□ -1.75
AMBRA1Q9C0C7 MT-TC-201ENST00000387405 66 ntBASIC4.14□□□□□ -1.75
AMBRA1Q9C0C7 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
AMBRA1Q9C0C7 RNA5SP332-201ENST00000391063 115 ntBASIC4.14□□□□□ -1.75
AMBRA1Q9C0C7 HSPD1P16-201ENST00000402302 394 ntBASIC4.14□□□□□ -1.75
AMBRA1Q9C0C7 RNU2-41P-201ENST00000410991 178 ntBASIC4.14□□□□□ -1.75
AMBRA1Q9C0C7 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.14□□□□□ -1.75
AMBRA1Q9C0C7 HMGN1P24-201ENST00000412282 298 ntBASIC4.14□□□□□ -1.75
AMBRA1Q9C0C7 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC4.14□□□□□ -1.75
AMBRA1Q9C0C7 SNRPEP10-201ENST00000420249 274 ntBASIC4.14□□□□□ -1.75
AMBRA1Q9C0C7 AC245054.1-201ENST00000420944 258 ntBASIC4.14□□□□□ -1.75
AMBRA1Q9C0C7 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.14□□□□□ -1.75
AMBRA1Q9C0C7 MTND4P28-201ENST00000426217 387 ntBASIC4.14□□□□□ -1.75
AMBRA1Q9C0C7 RSL24D1P6-201ENST00000426934 401 ntBASIC4.14□□□□□ -1.75
AMBRA1Q9C0C7 GTF2IP20-201ENST00000431663 360 ntBASIC4.14□□□□□ -1.75
AMBRA1Q9C0C7 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
AMBRA1Q9C0C7 AL606489.2-201ENST00000433886 234 ntBASIC4.14□□□□□ -1.75
AMBRA1Q9C0C7 AC098614.3-201ENST00000438957 440 ntBASIC4.14□□□□□ -1.75
AMBRA1Q9C0C7 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.14□□□□□ -1.75
AMBRA1Q9C0C7 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC4.14□□□□□ -1.75
AMBRA1Q9C0C7 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC4.14□□□□□ -1.75
AMBRA1Q9C0C7 AC012671.1-201ENST00000451912 203 ntBASIC4.14□□□□□ -1.75
AMBRA1Q9C0C7 HMGB3P21-201ENST00000452483 547 ntBASIC4.14□□□□□ -1.75
AMBRA1Q9C0C7 MTND1P9-201ENST00000453775 944 ntBASIC4.14□□□□□ -1.75
AMBRA1Q9C0C7 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC4.14□□□□□ -1.75
AMBRA1Q9C0C7 AC010326.1-201ENST00000462726 602 ntBASIC4.14□□□□□ -1.75
AMBRA1Q9C0C7 AP000852.1-201ENST00000472460 573 ntBASIC4.14□□□□□ -1.75
AMBRA1Q9C0C7 AC083798.1-201ENST00000472671 131 ntBASIC4.14□□□□□ -1.75
AMBRA1Q9C0C7 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.14□□□□□ -1.75
AMBRA1Q9C0C7 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC4.14□□□□□ -1.75
AMBRA1Q9C0C7 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC4.14□□□□□ -1.75
AMBRA1Q9C0C7 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.14□□□□□ -1.75
AMBRA1Q9C0C7 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC4.14□□□□□ -1.75
AMBRA1Q9C0C7 SNORD116-26-201ENST00000516006 96 ntBASIC4.14□□□□□ -1.75
AMBRA1Q9C0C7 RNU6-27P-201ENST00000516146 107 ntBASIC4.14□□□□□ -1.75
AMBRA1Q9C0C7 RNU6-875P-201ENST00000516488 106 ntBASIC4.14□□□□□ -1.75
AMBRA1Q9C0C7 RNU6-1220P-201ENST00000517126 108 ntBASIC4.14□□□□□ -1.75
AMBRA1Q9C0C7 AF186190.1-201ENST00000517470 480 ntBASIC4.14□□□□□ -1.75
AMBRA1Q9C0C7 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC4.14□□□□□ -1.75
AMBRA1Q9C0C7 HIF1AP1-201ENST00000553642 175 ntBASIC4.14□□□□□ -1.75
AMBRA1Q9C0C7 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.14□□□□□ -1.75
AMBRA1Q9C0C7 AC068446.3-201ENST00000555285 382 ntBASIC4.14□□□□□ -1.75
AMBRA1Q9C0C7 AC034105.3-201ENST00000565294 442 ntBASIC4.14□□□□□ -1.75
AMBRA1Q9C0C7 RPL23AP97-201ENST00000568955 471 ntBASIC4.14□□□□□ -1.75
AMBRA1Q9C0C7 MIR4277-201ENST00000578298 84 ntBASIC4.14□□□□□ -1.75
AMBRA1Q9C0C7 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.14□□□□□ -1.75
AMBRA1Q9C0C7 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.14□□□□□ -1.75
AMBRA1Q9C0C7 AC008945.2-201ENST00000606056 604 ntBASIC4.14□□□□□ -1.75
AMBRA1Q9C0C7 Y_RNA.804-201ENST00000615262 101 ntBASIC4.14□□□□□ -1.75
AMBRA1Q9C0C7 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC4.14□□□□□ -1.75
AMBRA1Q9C0C7 uc_338.12-201ENST00000616344 181 ntBASIC4.14□□□□□ -1.75
AMBRA1Q9C0C7 AC002550.2-201ENST00000621246 394 ntBASIC4.14□□□□□ -1.75
AMBRA1Q9C0C7 AC007546.2-201ENST00000623996 360 ntBASIC4.14□□□□□ -1.75
AMBRA1Q9C0C7 AC006065.6-201ENST00000625201 545 ntBASIC4.14□□□□□ -1.75
AMBRA1Q9C0C7 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.14□□□□□ -1.75
AMBRA1Q9C0C7 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC4.14□□□□□ -1.75
AMBRA1Q9C0C7 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
AMBRA1Q9C0C7 OR14L1P-202ENST00000641545 3009 ntBASIC4.14□□□□□ -1.75
AMBRA1Q9C0C7 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC4.14□□□□□ -1.75
AMBRA1Q9C0C7 AL592182.3-201ENST00000642132 3304 ntBASIC4.14□□□□□ -1.75
AMBRA1Q9C0C7 CKAP2P1-201ENST00000555477 2049 ntBASIC4.14□□□□□ -1.75
AMBRA1Q9C0C7 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
AMBRA1Q9C0C7 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
AMBRA1Q9C0C7 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
AMBRA1Q9C0C7 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
AMBRA1Q9C0C7 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
AMBRA1Q9C0C7 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
AMBRA1Q9C0C7 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.13□□□□□ -1.75
AMBRA1Q9C0C7 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
AMBRA1Q9C0C7 AL590240.1-201ENST00000334118 313 ntBASIC4.13□□□□□ -1.75
AMBRA1Q9C0C7 Y_RNA.381-201ENST00000365666 102 ntBASIC4.13□□□□□ -1.75
AMBRA1Q9C0C7 SNORA70F-201ENST00000384142 135 ntBASIC4.13□□□□□ -1.75
AMBRA1Q9C0C7 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
AMBRA1Q9C0C7 SNORA48.7-201ENST00000391302 135 ntBASIC4.13□□□□□ -1.75
AMBRA1Q9C0C7 AC068050.1-201ENST00000394891 380 ntBASIC4.13□□□□□ -1.75
AMBRA1Q9C0C7 RNU2-62P-201ENST00000410868 191 ntBASIC4.13□□□□□ -1.75
AMBRA1Q9C0C7 SNORA74C-2-201ENST00000411179 201 ntBASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms