Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC1.66□□□□□ -2.14
SPG11Q96JI7 AC087441.2-201ENST00000529141 262 ntBASIC1.66□□□□□ -2.14
SPG11Q96JI7 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC1.66□□□□□ -2.14
SPG11Q96JI7 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC1.66□□□□□ -2.14
SPG11Q96JI7 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC1.66□□□□□ -2.14
SPG11Q96JI7 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
SPG11Q96JI7 DEFB109C-201ENST00000382575 264 ntBASIC1.66□□□□□ -2.14
SPG11Q96JI7 DEFB109B-201ENST00000382656 264 ntBASIC1.66□□□□□ -2.14
SPG11Q96JI7 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC1.66□□□□□ -2.14
SPG11Q96JI7 AL445685.2-201ENST00000422551 342 ntBASIC1.66□□□□□ -2.14
SPG11Q96JI7 ATP5F1P1-201ENST00000433775 569 ntBASIC1.66□□□□□ -2.14
SPG11Q96JI7 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC1.66□□□□□ -2.14
SPG11Q96JI7 RPL21P18-201ENST00000469899 480 ntBASIC1.66□□□□□ -2.14
SPG11Q96JI7 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC1.66□□□□□ -2.14
SPG11Q96JI7 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC1.66□□□□□ -2.14
SPG11Q96JI7 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC1.66□□□□□ -2.14
SPG11Q96JI7 AC244517.12-201ENST00000623581 663 ntBASIC1.66□□□□□ -2.14
SPG11Q96JI7 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.66□□□□□ -2.14
SPG11Q96JI7 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC1.66□□□□□ -2.14
SPG11Q96JI7 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC1.65□□□□□ -2.14
SPG11Q96JI7 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
SPG11Q96JI7 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC1.65□□□□□ -2.15
SPG11Q96JI7 AL590762.3-201ENST00000436372 640 ntBASIC1.65□□□□□ -2.15
SPG11Q96JI7 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC1.65□□□□□ -2.15
SPG11Q96JI7 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC1.65□□□□□ -2.15
SPG11Q96JI7 AC108078.1-201ENST00000508073 725 ntBASIC1.65□□□□□ -2.15
SPG11Q96JI7 IGKV2D-36-201ENST00000518643 226 ntBASIC1.65□□□□□ -2.15
SPG11Q96JI7 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC1.65□□□□□ -2.15
SPG11Q96JI7 AL389895.1-201ENST00000554127 252 ntBASIC1.65□□□□□ -2.15
SPG11Q96JI7 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC1.65□□□□□ -2.15
SPG11Q96JI7 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC1.65□□□□□ -2.15
SPG11Q96JI7 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC1.65□□□□□ -2.15
SPG11Q96JI7 AL645944.1-201ENST00000603857 493 ntBASIC1.65□□□□□ -2.15
SPG11Q96JI7 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC1.65□□□□□ -2.15
SPG11Q96JI7 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.65□□□□□ -2.15
SPG11Q96JI7 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
SPG11Q96JI7 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
SPG11Q96JI7 Y_RNA.390-201ENST00000383932 102 ntBASIC1.65□□□□□ -2.15
SPG11Q96JI7 RNY1P4-201ENST00000384595 115 ntBASIC1.65□□□□□ -2.15
SPG11Q96JI7 AC021382.1-201ENST00000483523 359 ntBASIC1.65□□□□□ -2.15
SPG11Q96JI7 RNA5SP385-201ENST00000515947 110 ntBASIC1.65□□□□□ -2.15
SPG11Q96JI7 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC1.65□□□□□ -2.15
SPG11Q96JI7 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.65□□□□□ -2.15
SPG11Q96JI7 SEPT7P7-201ENST00000420492 1301 ntBASIC1.64□□□□□ -2.15
SPG11Q96JI7 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
SPG11Q96JI7 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC1.64□□□□□ -2.15
SPG11Q96JI7 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
SPG11Q96JI7 SNORD21-201ENST00000383953 95 ntBASIC1.64□□□□□ -2.15
SPG11Q96JI7 VN1R31P-201ENST00000417498 730 ntBASIC1.64□□□□□ -2.15
SPG11Q96JI7 AC023128.2-201ENST00000420880 1223 ntBASIC1.64□□□□□ -2.15
SPG11Q96JI7 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC1.64□□□□□ -2.15
SPG11Q96JI7 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC1.64□□□□□ -2.15
SPG11Q96JI7 AC104564.1-201ENST00000493028 407 ntBASIC1.64□□□□□ -2.15
SPG11Q96JI7 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC1.64□□□□□ -2.15
SPG11Q96JI7 RNU6-1223P-201ENST00000517124 104 ntBASIC1.64□□□□□ -2.15
SPG11Q96JI7 AC087854.1-201ENST00000519706 414 ntBASIC1.64□□□□□ -2.15
SPG11Q96JI7 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.64□□□□□ -2.15
SPG11Q96JI7 AC098848.2-201ENST00000588023 330 ntBASIC1.64□□□□□ -2.15
SPG11Q96JI7 PCF11-AS1-201ENST00000602322 1516 ntBASIC1.64□□□□□ -2.15
SPG11Q96JI7 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
SPG11Q96JI7 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC1.64□□□□□ -2.15
SPG11Q96JI7 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.64□□□□□ -2.15
SPG11Q96JI7 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.64□□□□□ -2.15
SPG11Q96JI7 GSTA12P-201ENST00000402398 508 ntBASIC1.64□□□□□ -2.15
SPG11Q96JI7 SNORD88.1-201ENST00000408684 91 ntBASIC1.64□□□□□ -2.15
SPG11Q96JI7 AC234782.4-201ENST00000417646 1048 ntBASIC1.64□□□□□ -2.15
SPG11Q96JI7 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC1.64□□□□□ -2.15
SPG11Q96JI7 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC1.64□□□□□ -2.15
SPG11Q96JI7 AC091953.2-201ENST00000623979 160 ntBASIC1.64□□□□□ -2.15
SPG11Q96JI7 ANKRD18EP-201ENST00000405487 2632 ntBASIC1.63□□□□□ -2.15
SPG11Q96JI7 DCAF13P1-201ENST00000495256 1330 ntBASIC1.63□□□□□ -2.15
SPG11Q96JI7 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC1.63□□□□□ -2.15
SPG11Q96JI7 RNA5SP457-201ENST00000363657 124 ntBASIC1.63□□□□□ -2.15
SPG11Q96JI7 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC1.63□□□□□ -2.15
SPG11Q96JI7 AC005005.2-201ENST00000420779 380 ntBASIC1.63□□□□□ -2.15
SPG11Q96JI7 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC1.63□□□□□ -2.15
SPG11Q96JI7 AC009474.2-201ENST00000451383 136 ntBASIC1.63□□□□□ -2.15
SPG11Q96JI7 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC1.63□□□□□ -2.15
SPG11Q96JI7 USP9YP5-201ENST00000511770 630 ntBASIC1.63□□□□□ -2.15
SPG11Q96JI7 AP003467.2-201ENST00000520175 319 ntBASIC1.63□□□□□ -2.15
SPG11Q96JI7 AC022634.1-201ENST00000520765 532 ntBASIC1.63□□□□□ -2.15
SPG11Q96JI7 IGHVIII-5-1-201ENST00000523059 99 ntBASIC1.63□□□□□ -2.15
SPG11Q96JI7 HIGD1AP10-201ENST00000527837 282 ntBASIC1.63□□□□□ -2.15
SPG11Q96JI7 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC1.63□□□□□ -2.15
SPG11Q96JI7 RPL23AP61-201ENST00000623642 466 ntBASIC1.63□□□□□ -2.15
SPG11Q96JI7 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
SPG11Q96JI7 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
SPG11Q96JI7 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC1.63□□□□□ -2.15
SPG11Q96JI7 SNORA68.2-201ENST00000391263 128 ntBASIC1.62□□□□□ -2.15
SPG11Q96JI7 AC005534.2-201ENST00000431047 433 ntBASIC1.62□□□□□ -2.15
SPG11Q96JI7 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC1.62□□□□□ -2.15
SPG11Q96JI7 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.62□□□□□ -2.15
SPG11Q96JI7 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC1.62□□□□□ -2.15
SPG11Q96JI7 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.62□□□□□ -2.15
SPG11Q96JI7 RPPH1-2P-201ENST00000516688 293 ntBASIC1.62□□□□□ -2.15
SPG11Q96JI7 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC1.62□□□□□ -2.15
SPG11Q96JI7 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.62□□□□□ -2.15
SPG11Q96JI7 HMGB3P26-201ENST00000560051 582 ntBASIC1.62□□□□□ -2.15
SPG11Q96JI7 AC008687.2-201ENST00000597865 520 ntBASIC1.62□□□□□ -2.15
SPG11Q96JI7 AC068790.3-201ENST00000602988 553 ntBASIC1.62□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 127 ms