Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC1.74□□□□□ -2.13
SPTA1P02549 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
SPTA1P02549 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
SPTA1P02549 AC234782.4-201ENST00000417646 1048 ntBASIC1.74□□□□□ -2.13
SPTA1P02549 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC1.74□□□□□ -2.13
SPTA1P02549 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC1.74□□□□□ -2.13
SPTA1P02549 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC1.74□□□□□ -2.13
SPTA1P02549 AL137100.2-201ENST00000555786 315 ntBASIC1.74□□□□□ -2.13
SPTA1P02549 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC1.74□□□□□ -2.13
SPTA1P02549 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC1.74□□□□□ -2.13
SPTA1P02549 AL160394.1-201ENST00000624765 724 ntBASIC1.74□□□□□ -2.13
SPTA1P02549 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.74□□□□□ -2.13
SPTA1P02549 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.74□□□□□ -2.13
SPTA1P02549 AC092435.3-201ENST00000565538 3654 ntBASIC1.74□□□□□ -2.13
SPTA1P02549 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.74□□□□□ -2.13
SPTA1P02549 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
SPTA1P02549 RNU6-328P-201ENST00000390887 106 ntBASIC1.74□□□□□ -2.13
SPTA1P02549 AC005005.2-201ENST00000420779 380 ntBASIC1.74□□□□□ -2.13
SPTA1P02549 RPL36AP6-201ENST00000435770 321 ntBASIC1.74□□□□□ -2.13
SPTA1P02549 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC1.74□□□□□ -2.13
SPTA1P02549 MTND2P29-201ENST00000438595 412 ntBASIC1.74□□□□□ -2.13
SPTA1P02549 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC1.74□□□□□ -2.13
SPTA1P02549 MTAPP1-201ENST00000489154 819 ntBASIC1.74□□□□□ -2.13
SPTA1P02549 Y_RNA.681-201ENST00000516445 113 ntBASIC1.74□□□□□ -2.13
SPTA1P02549 AP003467.2-201ENST00000520175 319 ntBASIC1.74□□□□□ -2.13
SPTA1P02549 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1.74□□□□□ -2.13
SPTA1P02549 AC068790.3-201ENST00000602988 553 ntBASIC1.74□□□□□ -2.13
SPTA1P02549 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
SPTA1P02549 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC1.74□□□□□ -2.13
SPTA1P02549 AC093775.1-201ENST00000624154 1868 ntBASIC1.73□□□□□ -2.13
SPTA1P02549 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC1.73□□□□□ -2.13
SPTA1P02549 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC1.73□□□□□ -2.13
SPTA1P02549 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.73□□□□□ -2.13
SPTA1P02549 RNU6ATAC9P-201ENST00000516210 116 ntBASIC1.73□□□□□ -2.13
SPTA1P02549 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.73□□□□□ -2.13
SPTA1P02549 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
SPTA1P02549 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
SPTA1P02549 Y_RNA.68-201ENST00000362881 102 ntBASIC1.72□□□□□ -2.13
SPTA1P02549 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
SPTA1P02549 HAR1A.1-201ENST00000459583 118 ntBASIC1.72□□□□□ -2.13
SPTA1P02549 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
SPTA1P02549 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC1.72□□□□□ -2.13
SPTA1P02549 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC1.72□□□□□ -2.13
SPTA1P02549 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC1.72□□□□□ -2.13
SPTA1P02549 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC1.72□□□□□ -2.13
SPTA1P02549 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC1.72□□□□□ -2.13
SPTA1P02549 uc_338.5-201ENST00000611839 155 ntBASIC1.72□□□□□ -2.13
SPTA1P02549 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC1.72□□□□□ -2.13
SPTA1P02549 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC1.72□□□□□ -2.13
SPTA1P02549 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC1.72□□□□□ -2.13
SPTA1P02549 AL353093.1-201ENST00000441292 436 ntBASIC1.72□□□□□ -2.13
SPTA1P02549 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.72□□□□□ -2.13
SPTA1P02549 AC107918.3-201ENST00000533272 382 ntBASIC1.72□□□□□ -2.13
SPTA1P02549 TPMTP1-201ENST00000592307 737 ntBASIC1.72□□□□□ -2.13
SPTA1P02549 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC1.72□□□□□ -2.13
SPTA1P02549 AL391646.1-201ENST00000603860 190 ntBASIC1.72□□□□□ -2.13
SPTA1P02549 AC084768.2-201ENST00000622736 221 ntBASIC1.72□□□□□ -2.13
SPTA1P02549 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC1.72□□□□□ -2.13
SPTA1P02549 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
SPTA1P02549 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
SPTA1P02549 AC008568.2-201ENST00000623862 2313 ntBASIC1.72□□□□□ -2.13
SPTA1P02549 AC006378.2-201ENST00000623178 2476 ntBASIC1.71□□□□□ -2.13
SPTA1P02549 RNU6-37P-201ENST00000362692 107 ntBASIC1.71□□□□□ -2.14
SPTA1P02549 RNU6-11P-201ENST00000364234 107 ntBASIC1.71□□□□□ -2.14
SPTA1P02549 OR5H15-201ENST00000383696 930 ntBASIC1.71□□□□□ -2.14
SPTA1P02549 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC1.71□□□□□ -2.14
SPTA1P02549 YWHAZP7-201ENST00000436906 631 ntBASIC1.71□□□□□ -2.14
SPTA1P02549 SDR42E1P3-201ENST00000438345 502 ntBASIC1.71□□□□□ -2.14
SPTA1P02549 KATNBL1P3-201ENST00000443475 909 ntBASIC1.71□□□□□ -2.14
SPTA1P02549 AC092155.2-201ENST00000454675 477 ntBASIC1.71□□□□□ -2.14
SPTA1P02549 AC091544.1-201ENST00000484702 348 ntBASIC1.71□□□□□ -2.14
SPTA1P02549 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
SPTA1P02549 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC1.71□□□□□ -2.14
SPTA1P02549 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
SPTA1P02549 Y_RNA.458-201ENST00000384240 102 ntBASIC1.71□□□□□ -2.14
SPTA1P02549 MIR548J-201ENST00000408833 112 ntBASIC1.71□□□□□ -2.14
SPTA1P02549 RNU6-516P-201ENST00000411381 104 ntBASIC1.71□□□□□ -2.14
SPTA1P02549 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC1.71□□□□□ -2.14
SPTA1P02549 AL590762.3-201ENST00000436372 640 ntBASIC1.71□□□□□ -2.14
SPTA1P02549 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.71□□□□□ -2.14
SPTA1P02549 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC1.71□□□□□ -2.14
SPTA1P02549 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC1.71□□□□□ -2.14
SPTA1P02549 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.71□□□□□ -2.14
SPTA1P02549 IGKV2D-36-201ENST00000518643 226 ntBASIC1.71□□□□□ -2.14
SPTA1P02549 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC1.71□□□□□ -2.14
SPTA1P02549 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.71□□□□□ -2.14
SPTA1P02549 SULT1C2P1-202ENST00000562418 459 ntBASIC1.71□□□□□ -2.14
SPTA1P02549 OR10AB1P-201ENST00000609613 938 ntBASIC1.71□□□□□ -2.14
SPTA1P02549 AC131902.3-201ENST00000611767 581 ntBASIC1.71□□□□□ -2.14
SPTA1P02549 U6.98-201ENST00000637157 84 ntBASIC1.71□□□□□ -2.14
SPTA1P02549 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC1.7□□□□□ -2.14
SPTA1P02549 SNORA7.1-201ENST00000363750 139 ntBASIC1.7□□□□□ -2.14
SPTA1P02549 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
SPTA1P02549 MIR625-201ENST00000385047 85 ntBASIC1.7□□□□□ -2.14
SPTA1P02549 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
SPTA1P02549 RNA5SP239-201ENST00000410218 129 ntBASIC1.7□□□□□ -2.14
SPTA1P02549 AL513331.1-201ENST00000411908 397 ntBASIC1.7□□□□□ -2.14
SPTA1P02549 NDUFS5P3-201ENST00000450668 321 ntBASIC1.7□□□□□ -2.14
SPTA1P02549 GOLGA5P1-201ENST00000507317 980 ntBASIC1.7□□□□□ -2.14
SPTA1P02549 RNA5SP385-201ENST00000515947 110 ntBASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms