Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 AC008885.1-201ENST00000514930 301 ntBASIC2.7□□□□□ -1.98
SHOX2O60902 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC2.7□□□□□ -1.98
SHOX2O60902 AC022690.1-201ENST00000526681 550 ntBASIC2.7□□□□□ -1.98
SHOX2O60902 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.7□□□□□ -1.98
SHOX2O60902 OR5BN1P-201ENST00000532955 829 ntBASIC2.7□□□□□ -1.98
SHOX2O60902 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.7□□□□□ -1.98
SHOX2O60902 AC004217.3-201ENST00000551552 878 ntBASIC2.7□□□□□ -1.98
SHOX2O60902 AC090695.1-201ENST00000561269 1222 ntBASIC2.7□□□□□ -1.98
SHOX2O60902 AC095057.3-201ENST00000567102 1157 ntBASIC2.7□□□□□ -1.98
SHOX2O60902 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC2.7□□□□□ -1.98
SHOX2O60902 XIAPP1-201ENST00000603162 600 ntBASIC2.7□□□□□ -1.98
SHOX2O60902 HSPE1P14-201ENST00000605812 302 ntBASIC2.7□□□□□ -1.98
SHOX2O60902 AC021851.1-201ENST00000608537 1082 ntBASIC2.7□□□□□ -1.98
SHOX2O60902 MIR7106-201ENST00000612419 65 ntBASIC2.7□□□□□ -1.98
SHOX2O60902 VN1R7P-201ENST00000619242 903 ntBASIC2.7□□□□□ -1.98
SHOX2O60902 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC2.7□□□□□ -1.98
SHOX2O60902 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC2.7□□□□□ -1.98
SHOX2O60902 AL512643.1-201ENST00000635735 524 ntBASIC2.7□□□□□ -1.98
SHOX2O60902 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.7□□□□□ -1.98
SHOX2O60902 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
SHOX2O60902 AC244517.1-201ENST00000606030 2086 ntBASIC2.69□□□□□ -1.98
SHOX2O60902 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.69□□□□□ -1.98
SHOX2O60902 RNU6-989P-201ENST00000362756 107 ntBASIC2.69□□□□□ -1.98
SHOX2O60902 SNORA5B-201ENST00000363786 132 ntBASIC2.69□□□□□ -1.98
SHOX2O60902 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC2.69□□□□□ -1.98
SHOX2O60902 AC233981.1-201ENST00000423224 461 ntBASIC2.69□□□□□ -1.98
SHOX2O60902 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC2.69□□□□□ -1.98
SHOX2O60902 TRIM60P13-201ENST00000432350 1283 ntBASIC2.69□□□□□ -1.98
SHOX2O60902 AC112220.1-201ENST00000434628 355 ntBASIC2.69□□□□□ -1.98
SHOX2O60902 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC2.69□□□□□ -1.98
SHOX2O60902 MTCYBP34-201ENST00000439552 670 ntBASIC2.69□□□□□ -1.98
SHOX2O60902 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.69□□□□□ -1.98
SHOX2O60902 NIPA2P5-201ENST00000452282 464 ntBASIC2.69□□□□□ -1.98
SHOX2O60902 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC2.69□□□□□ -1.98
SHOX2O60902 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.69□□□□□ -1.98
SHOX2O60902 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC2.69□□□□□ -1.98
SHOX2O60902 AC009812.2-201ENST00000517657 457 ntBASIC2.69□□□□□ -1.98
SHOX2O60902 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC2.69□□□□□ -1.98
SHOX2O60902 AC087481.2-201ENST00000565492 330 ntBASIC2.69□□□□□ -1.98
SHOX2O60902 MIR5092-201ENST00000583139 88 ntBASIC2.69□□□□□ -1.98
SHOX2O60902 AL451007.1-201ENST00000595491 289 ntBASIC2.69□□□□□ -1.98
SHOX2O60902 AC092474.3-201ENST00000603022 568 ntBASIC2.69□□□□□ -1.98
SHOX2O60902 AP003122.6-201ENST00000623831 495 ntBASIC2.69□□□□□ -1.98
SHOX2O60902 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC2.69□□□□□ -1.98
SHOX2O60902 CYP3A51P-201ENST00000633513 256 ntBASIC2.69□□□□□ -1.98
SHOX2O60902 SGO1P2-201ENST00000429458 1589 ntBASIC2.69□□□□□ -1.98
SHOX2O60902 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
SHOX2O60902 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC2.68□□□□□ -1.98
SHOX2O60902 AL672167.1-206ENST00000356293 943 ntBASIC2.68□□□□□ -1.98
SHOX2O60902 MIR649-201ENST00000384843 97 ntBASIC2.68□□□□□ -1.98
SHOX2O60902 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
SHOX2O60902 RNU6-77P-201ENST00000410554 91 ntBASIC2.68□□□□□ -1.98
SHOX2O60902 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.68□□□□□ -1.98
SHOX2O60902 FNDC3CP-201ENST00000420795 1155 ntBASIC2.68□□□□□ -1.98
SHOX2O60902 UBE2D3P2-201ENST00000424409 445 ntBASIC2.68□□□□□ -1.98
SHOX2O60902 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.68□□□□□ -1.98
SHOX2O60902 OFD1P12Y-201ENST00000427963 1207 ntBASIC2.68□□□□□ -1.98
SHOX2O60902 OFD1P13Y-201ENST00000431179 1232 ntBASIC2.68□□□□□ -1.98
SHOX2O60902 RPL27AP5-201ENST00000469428 449 ntBASIC2.68□□□□□ -1.98
SHOX2O60902 AC006445.1-201ENST00000491925 405 ntBASIC2.68□□□□□ -1.98
SHOX2O60902 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
SHOX2O60902 RNU4ATAC10P-201ENST00000516967 122 ntBASIC2.68□□□□□ -1.98
SHOX2O60902 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC2.68□□□□□ -1.98
SHOX2O60902 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC2.68□□□□□ -1.98
SHOX2O60902 BNIP3P4-201ENST00000604946 565 ntBASIC2.68□□□□□ -1.98
SHOX2O60902 AC008277.2-201ENST00000605196 797 ntBASIC2.68□□□□□ -1.98
SHOX2O60902 AC112503.2-201ENST00000609005 552 ntBASIC2.68□□□□□ -1.98
SHOX2O60902 AC096586.1-201ENST00000610267 561 ntBASIC2.68□□□□□ -1.98
SHOX2O60902 AL355810.1-201ENST00000614629 552 ntBASIC2.68□□□□□ -1.98
SHOX2O60902 AC073968.1-201ENST00000618594 637 ntBASIC2.68□□□□□ -1.98
SHOX2O60902 AC006249.1-201ENST00000621223 471 ntBASIC2.68□□□□□ -1.98
SHOX2O60902 AC007998.5-201ENST00000622938 237 ntBASIC2.68□□□□□ -1.98
SHOX2O60902 AC095031.1-201ENST00000623685 672 ntBASIC2.68□□□□□ -1.98
SHOX2O60902 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC2.68□□□□□ -1.98
SHOX2O60902 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC2.68□□□□□ -1.98
SHOX2O60902 MTND2P41-201ENST00000637599 773 ntBASIC2.68□□□□□ -1.98
SHOX2O60902 AP006437.1-201ENST00000641440 3685 ntBASIC2.67□□□□□ -1.98
SHOX2O60902 AC090740.1-201ENST00000623193 2262 ntBASIC2.67□□□□□ -1.98
SHOX2O60902 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
SHOX2O60902 AL450338.1-201ENST00000407987 512 ntBASIC2.67□□□□□ -1.98
SHOX2O60902 AC099677.1-201ENST00000420575 175 ntBASIC2.67□□□□□ -1.98
SHOX2O60902 UBE2V1P6-201ENST00000430840 422 ntBASIC2.67□□□□□ -1.98
SHOX2O60902 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC2.67□□□□□ -1.98
SHOX2O60902 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC2.67□□□□□ -1.98
SHOX2O60902 AC092170.1-201ENST00000440211 356 ntBASIC2.67□□□□□ -1.98
SHOX2O60902 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC2.67□□□□□ -1.98
SHOX2O60902 AL513124.1-201ENST00000450410 614 ntBASIC2.67□□□□□ -1.98
SHOX2O60902 RNU6-775P-201ENST00000459318 96 ntBASIC2.67□□□□□ -1.98
SHOX2O60902 AP001992.1-205ENST00000462248 379 ntBASIC2.67□□□□□ -1.98
SHOX2O60902 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
SHOX2O60902 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC2.67□□□□□ -1.98
SHOX2O60902 ERHP1-201ENST00000523006 310 ntBASIC2.67□□□□□ -1.98
SHOX2O60902 PRELID2P1-201ENST00000552837 301 ntBASIC2.67□□□□□ -1.98
SHOX2O60902 DNAJC8P1-201ENST00000554535 372 ntBASIC2.67□□□□□ -1.98
SHOX2O60902 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC2.67□□□□□ -1.98
SHOX2O60902 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC2.67□□□□□ -1.98
SHOX2O60902 COX6CP3-201ENST00000580869 223 ntBASIC2.67□□□□□ -1.98
SHOX2O60902 MIR3162-201ENST00000581818 82 ntBASIC2.67□□□□□ -1.98
SHOX2O60902 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC2.67□□□□□ -1.98
SHOX2O60902 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 143.4 ms