Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC1.36□□□□□ -2.19
CSMD3Q7Z407 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC1.36□□□□□ -2.19
CSMD3Q7Z407 RNU6-328P-201ENST00000390887 106 ntBASIC1.36□□□□□ -2.19
CSMD3Q7Z407 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
CSMD3Q7Z407 RPS3AP9-201ENST00000417027 792 ntBASIC1.36□□□□□ -2.19
CSMD3Q7Z407 SDR42E1P3-201ENST00000438345 502 ntBASIC1.36□□□□□ -2.19
CSMD3Q7Z407 AL353093.1-201ENST00000441292 436 ntBASIC1.36□□□□□ -2.19
CSMD3Q7Z407 RNA5SP220-201ENST00000516298 104 ntBASIC1.36□□□□□ -2.19
CSMD3Q7Z407 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.36□□□□□ -2.19
CSMD3Q7Z407 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.36□□□□□ -2.19
CSMD3Q7Z407 AC084768.2-201ENST00000622736 221 ntBASIC1.36□□□□□ -2.19
CSMD3Q7Z407 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.36□□□□□ -2.19
CSMD3Q7Z407 AL136164.4-201ENST00000625013 2135 ntBASIC1.36□□□□□ -2.19
CSMD3Q7Z407 RNU6-146P-201ENST00000384602 108 ntBASIC1.36□□□□□ -2.19
CSMD3Q7Z407 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
CSMD3Q7Z407 CBWD4P-201ENST00000445695 655 ntBASIC1.36□□□□□ -2.19
CSMD3Q7Z407 RPL21P134-201ENST00000453468 483 ntBASIC1.36□□□□□ -2.19
CSMD3Q7Z407 RPL23AP44-201ENST00000482216 473 ntBASIC1.36□□□□□ -2.19
CSMD3Q7Z407 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC1.36□□□□□ -2.19
CSMD3Q7Z407 IGLV3-17-201ENST00000519099 244 ntBASIC1.36□□□□□ -2.19
CSMD3Q7Z407 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.36□□□□□ -2.19
CSMD3Q7Z407 ZDHHC20P3-201ENST00000531576 336 ntBASIC1.36□□□□□ -2.19
CSMD3Q7Z407 AC068339.2-201ENST00000534395 618 ntBASIC1.36□□□□□ -2.19
CSMD3Q7Z407 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC1.36□□□□□ -2.19
CSMD3Q7Z407 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC1.36□□□□□ -2.19
CSMD3Q7Z407 AC244517.12-201ENST00000623581 663 ntBASIC1.36□□□□□ -2.19
CSMD3Q7Z407 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
CSMD3Q7Z407 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
CSMD3Q7Z407 SAR1AP4-201ENST00000429225 591 ntBASIC1.35□□□□□ -2.19
CSMD3Q7Z407 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC1.35□□□□□ -2.19
CSMD3Q7Z407 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC1.35□□□□□ -2.19
CSMD3Q7Z407 AL389895.1-201ENST00000554127 252 ntBASIC1.35□□□□□ -2.19
CSMD3Q7Z407 AC068446.3-201ENST00000555285 382 ntBASIC1.35□□□□□ -2.19
CSMD3Q7Z407 PSMA6P4-201ENST00000603247 718 ntBASIC1.35□□□□□ -2.19
CSMD3Q7Z407 AC006254.3-201ENST00000603353 884 ntBASIC1.35□□□□□ -2.19
CSMD3Q7Z407 AC073387.2-201ENST00000604797 784 ntBASIC1.35□□□□□ -2.19
CSMD3Q7Z407 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC1.35□□□□□ -2.19
CSMD3Q7Z407 MIR6767-201ENST00000637302 66 ntBASIC1.35□□□□□ -2.19
CSMD3Q7Z407 RPS6P12-201ENST00000432491 726 ntBASIC1.35□□□□□ -2.19
CSMD3Q7Z407 MUPP-201ENST00000438111 566 ntBASIC1.35□□□□□ -2.19
CSMD3Q7Z407 GZMAP1-201ENST00000503054 631 ntBASIC1.35□□□□□ -2.19
CSMD3Q7Z407 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC1.35□□□□□ -2.19
CSMD3Q7Z407 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC1.35□□□□□ -2.19
CSMD3Q7Z407 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC1.35□□□□□ -2.19
CSMD3Q7Z407 AC008015.1-201ENST00000555505 465 ntBASIC1.35□□□□□ -2.19
CSMD3Q7Z407 HMGN2P28-201ENST00000606102 262 ntBASIC1.35□□□□□ -2.19
CSMD3Q7Z407 MFF-206ENST00000392059 1710 ntTSL 5 BASIC1.35□□□□□ -2.19
CSMD3Q7Z407 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
CSMD3Q7Z407 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC1.35□□□□□ -2.19
CSMD3Q7Z407 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
CSMD3Q7Z407 Y_RNA.205-201ENST00000364128 113 ntBASIC1.35□□□□□ -2.19
CSMD3Q7Z407 DYNLT3P1-201ENST00000378574 347 ntBASIC1.35□□□□□ -2.19
CSMD3Q7Z407 SNORA48.3-201ENST00000391081 134 ntBASIC1.35□□□□□ -2.19
CSMD3Q7Z407 RPL5P19-201ENST00000404228 893 ntBASIC1.35□□□□□ -2.19
CSMD3Q7Z407 RNA5SP239-201ENST00000410218 129 ntBASIC1.35□□□□□ -2.19
CSMD3Q7Z407 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC1.35□□□□□ -2.19
CSMD3Q7Z407 USP9YP8-201ENST00000441913 500 ntBASIC1.35□□□□□ -2.19
CSMD3Q7Z407 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.35□□□□□ -2.19
CSMD3Q7Z407 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC1.35□□□□□ -2.19
CSMD3Q7Z407 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC1.35□□□□□ -2.19
CSMD3Q7Z407 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC1.35□□□□□ -2.19
CSMD3Q7Z407 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC1.35□□□□□ -2.19
CSMD3Q7Z407 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC1.35□□□□□ -2.19
CSMD3Q7Z407 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC1.35□□□□□ -2.19
CSMD3Q7Z407 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC1.35□□□□□ -2.19
CSMD3Q7Z407 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.35□□□□□ -2.19
CSMD3Q7Z407 AL354943.1-201ENST00000572103 781 ntBASIC1.35□□□□□ -2.19
CSMD3Q7Z407 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC1.35□□□□□ -2.19
CSMD3Q7Z407 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC1.35□□□□□ -2.19
CSMD3Q7Z407 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.19
CSMD3Q7Z407 AC103988.1-201ENST00000566382 2177 ntBASIC1.34□□□□□ -2.19
CSMD3Q7Z407 ZNF720P1-201ENST00000562403 1939 ntBASIC1.34□□□□□ -2.19
CSMD3Q7Z407 SET-203ENST00000372688 801 ntTSL 2 BASIC1.34□□□□□ -2.19
CSMD3Q7Z407 DEFA7P-201ENST00000382676 285 ntBASIC1.34□□□□□ -2.19
CSMD3Q7Z407 AC140059.1-201ENST00000489238 361 ntBASIC1.34□□□□□ -2.19
CSMD3Q7Z407 AL731537.2-201ENST00000561565 951 ntBASIC1.34□□□□□ -2.19
CSMD3Q7Z407 MIR5089-201ENST00000580047 84 ntBASIC1.34□□□□□ -2.19
CSMD3Q7Z407 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC1.34□□□□□ -2.19
CSMD3Q7Z407 AC120053.1-201ENST00000607706 736 ntBASIC1.34□□□□□ -2.19
CSMD3Q7Z407 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
CSMD3Q7Z407 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
CSMD3Q7Z407 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC1.34□□□□□ -2.19
CSMD3Q7Z407 MAPK10-266ENST00000641066 6555 ntBASIC1.34□□□□□ -2.2
CSMD3Q7Z407 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC1.34□□□□□ -2.2
CSMD3Q7Z407 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC1.34□□□□□ -2.2
CSMD3Q7Z407 SNORA26.7-201ENST00000391288 122 ntBASIC1.34□□□□□ -2.2
CSMD3Q7Z407 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC1.34□□□□□ -2.2
CSMD3Q7Z407 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC1.34□□□□□ -2.2
CSMD3Q7Z407 RBM6-203ENST00000421682 684 ntTSL 2 BASIC1.34□□□□□ -2.2
CSMD3Q7Z407 YWHAZP7-201ENST00000436906 631 ntBASIC1.34□□□□□ -2.2
CSMD3Q7Z407 BX322784.1-201ENST00000455793 1077 ntBASIC1.34□□□□□ -2.2
CSMD3Q7Z407 PPP1R2P5-201ENST00000457256 603 ntBASIC1.34□□□□□ -2.2
CSMD3Q7Z407 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.34□□□□□ -2.2
CSMD3Q7Z407 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.34□□□□□ -2.2
CSMD3Q7Z407 MTCO3P13-201ENST00000577757 781 ntBASIC1.34□□□□□ -2.2
CSMD3Q7Z407 LRRC37A5P-203ENST00000580181 585 ntBASIC1.34□□□□□ -2.2
CSMD3Q7Z407 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC1.34□□□□□ -2.2
CSMD3Q7Z407 MIR6715B-201ENST00000637172 77 ntBASIC1.34□□□□□ -2.2
CSMD3Q7Z407 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC1.34□□□□□ -2.2
CSMD3Q7Z407 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC1.34□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms