Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 AC009302.1-201ENST00000417147 390 ntBASIC0.73□□□□□ -2.29
SYNE1Q8NF91 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC0.73□□□□□ -2.29
SYNE1Q8NF91 AC108667.1-201ENST00000428618 249 ntBASIC0.73□□□□□ -2.29
SYNE1Q8NF91 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
SYNE1Q8NF91 DYNLL1P6-201ENST00000503440 264 ntBASIC0.73□□□□□ -2.29
SYNE1Q8NF91 RNA5SP281-201ENST00000516504 135 ntBASIC0.73□□□□□ -2.29
SYNE1Q8NF91 RN7SKP234-201ENST00000517173 224 ntBASIC0.73□□□□□ -2.29
SYNE1Q8NF91 AC022069.1-201ENST00000582910 658 ntBASIC0.73□□□□□ -2.29
SYNE1Q8NF91 AP000787.2-201ENST00000604432 568 ntBASIC0.73□□□□□ -2.29
SYNE1Q8NF91 AC105429.2-201ENST00000610567 517 ntBASIC0.73□□□□□ -2.29
SYNE1Q8NF91 AC006111.3-201ENST00000622137 383 ntBASIC0.73□□□□□ -2.29
SYNE1Q8NF91 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC0.73□□□□□ -2.29
SYNE1Q8NF91 AC007256.1-201ENST00000392253 2765 ntBASIC0.73□□□□□ -2.29
SYNE1Q8NF91 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.72□□□□□ -2.29
SYNE1Q8NF91 AC104454.1-201ENST00000421341 1401 ntBASIC0.72□□□□□ -2.29
SYNE1Q8NF91 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC0.72□□□□□ -2.29
SYNE1Q8NF91 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC0.72□□□□□ -2.29
SYNE1Q8NF91 RNA5SP325-201ENST00000363756 130 ntBASIC0.72□□□□□ -2.29
SYNE1Q8NF91 RN7SKP32-201ENST00000410167 303 ntBASIC0.72□□□□□ -2.29
SYNE1Q8NF91 RPS15AP28-201ENST00000435088 386 ntBASIC0.72□□□□□ -2.29
SYNE1Q8NF91 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC0.72□□□□□ -2.29
SYNE1Q8NF91 SNORA31.1-201ENST00000515993 133 ntBASIC0.72□□□□□ -2.29
SYNE1Q8NF91 SNORA31.5-201ENST00000516190 133 ntBASIC0.72□□□□□ -2.29
SYNE1Q8NF91 AC034268.2-201ENST00000571784 482 ntBASIC0.72□□□□□ -2.29
SYNE1Q8NF91 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC0.72□□□□□ -2.29
SYNE1Q8NF91 AC067747.1-201ENST00000608026 250 ntBASIC0.72□□□□□ -2.29
SYNE1Q8NF91 AC016252.1-201ENST00000609721 474 ntBASIC0.72□□□□□ -2.29
SYNE1Q8NF91 AC116563.2-201ENST00000624751 535 ntBASIC0.72□□□□□ -2.29
SYNE1Q8NF91 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC0.72□□□□□ -2.29
SYNE1Q8NF91 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC0.72□□□□□ -2.29
SYNE1Q8NF91 THUMPD3P1-201ENST00000506556 1480 ntBASIC0.72□□□□□ -2.29
SYNE1Q8NF91 DHFRP5-201ENST00000406944 564 ntBASIC0.72□□□□□ -2.29
SYNE1Q8NF91 RNU2-2P-201ENST00000410396 191 ntBASIC0.72□□□□□ -2.29
SYNE1Q8NF91 RPS7P9-201ENST00000414704 586 ntBASIC0.72□□□□□ -2.29
SYNE1Q8NF91 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC0.72□□□□□ -2.29
SYNE1Q8NF91 AL139415.2-201ENST00000431968 163 ntBASIC0.72□□□□□ -2.29
SYNE1Q8NF91 SETP8-201ENST00000435341 628 ntBASIC0.72□□□□□ -2.29
SYNE1Q8NF91 HIGD1AP2-201ENST00000446367 280 ntBASIC0.72□□□□□ -2.29
SYNE1Q8NF91 RPS26P21-201ENST00000475397 348 ntBASIC0.72□□□□□ -2.29
SYNE1Q8NF91 MTAPP1-201ENST00000489154 819 ntBASIC0.72□□□□□ -2.29
SYNE1Q8NF91 RN7SL636P-201ENST00000497504 294 ntBASIC0.72□□□□□ -2.29
SYNE1Q8NF91 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC0.72□□□□□ -2.29
SYNE1Q8NF91 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC0.72□□□□□ -2.29
SYNE1Q8NF91 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC0.72□□□□□ -2.29
SYNE1Q8NF91 OR5D17P-201ENST00000531492 978 ntBASIC0.72□□□□□ -2.29
SYNE1Q8NF91 GNAI2P1-201ENST00000541815 315 ntBASIC0.72□□□□□ -2.29
SYNE1Q8NF91 AL592494.3-201ENST00000609485 464 ntBASIC0.72□□□□□ -2.29
SYNE1Q8NF91 U2.15-201ENST00000611544 191 ntBASIC0.72□□□□□ -2.29
SYNE1Q8NF91 U2.16-201ENST00000613119 191 ntBASIC0.72□□□□□ -2.29
SYNE1Q8NF91 U2.12-201ENST00000613778 191 ntBASIC0.72□□□□□ -2.29
SYNE1Q8NF91 U2.20-201ENST00000613956 192 ntBASIC0.72□□□□□ -2.29
SYNE1Q8NF91 U2.9-201ENST00000615427 191 ntBASIC0.72□□□□□ -2.29
SYNE1Q8NF91 U2.11-201ENST00000616345 191 ntBASIC0.72□□□□□ -2.29
SYNE1Q8NF91 U2.2-201ENST00000616535 191 ntBASIC0.72□□□□□ -2.29
SYNE1Q8NF91 U2.3-201ENST00000617785 191 ntBASIC0.72□□□□□ -2.29
SYNE1Q8NF91 U2.19-201ENST00000618602 191 ntBASIC0.72□□□□□ -2.29
SYNE1Q8NF91 RNU2-1-201ENST00000618664 191 ntBASIC0.72□□□□□ -2.29
SYNE1Q8NF91 U2.6-201ENST00000619225 191 ntBASIC0.72□□□□□ -2.29
SYNE1Q8NF91 U2.5-201ENST00000619465 191 ntBASIC0.72□□□□□ -2.29
SYNE1Q8NF91 U2.10-201ENST00000620268 191 ntBASIC0.72□□□□□ -2.29
SYNE1Q8NF91 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC0.72□□□□□ -2.29
SYNE1Q8NF91 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC0.72□□□□□ -2.29
SYNE1Q8NF91 RPS15AP40-201ENST00000419621 391 ntBASIC0.72□□□□□ -2.29
SYNE1Q8NF91 AC023128.2-201ENST00000420880 1223 ntBASIC0.72□□□□□ -2.29
SYNE1Q8NF91 RPL23AP74-201ENST00000437246 471 ntBASIC0.72□□□□□ -2.29
SYNE1Q8NF91 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC0.72□□□□□ -2.29
SYNE1Q8NF91 MTCO3P11-201ENST00000455103 774 ntBASIC0.72□□□□□ -2.29
SYNE1Q8NF91 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC0.72□□□□□ -2.29
SYNE1Q8NF91 HMGB3P30-201ENST00000457863 606 ntBASIC0.72□□□□□ -2.29
SYNE1Q8NF91 MTND4LP22-201ENST00000508209 276 ntBASIC0.72□□□□□ -2.29
SYNE1Q8NF91 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC0.72□□□□□ -2.29
SYNE1Q8NF91 AL391156.1-201ENST00000554965 554 ntBASIC0.72□□□□□ -2.29
SYNE1Q8NF91 MIR3605-201ENST00000583214 100 ntBASIC0.72□□□□□ -2.29
SYNE1Q8NF91 AL359821.1-201ENST00000605519 182 ntBASIC0.72□□□□□ -2.29
SYNE1Q8NF91 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC0.72□□□□□ -2.29
SYNE1Q8NF91 AC092447.7-201ENST00000422212 1621 ntBASIC0.72□□□□□ -2.29
SYNE1Q8NF91 SEPT7P7-201ENST00000420492 1301 ntBASIC0.72□□□□□ -2.29
SYNE1Q8NF91 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC0.72□□□□□ -2.29
SYNE1Q8NF91 AC007064.1-201ENST00000412238 351 ntBASIC0.72□□□□□ -2.29
SYNE1Q8NF91 ATG3P1-201ENST00000419507 911 ntBASIC0.72□□□□□ -2.29
SYNE1Q8NF91 AC078918.1-201ENST00000498515 228 ntBASIC0.72□□□□□ -2.29
SYNE1Q8NF91 RPS27P27-201ENST00000498779 255 ntBASIC0.72□□□□□ -2.29
SYNE1Q8NF91 AC128657.1-201ENST00000549459 145 ntBASIC0.72□□□□□ -2.29
SYNE1Q8NF91 AC074029.1-201ENST00000552531 1044 ntBASIC0.72□□□□□ -2.29
SYNE1Q8NF91 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC0.72□□□□□ -2.29
SYNE1Q8NF91 AC010928.3-201ENST00000587712 541 ntBASIC0.72□□□□□ -2.29
SYNE1Q8NF91 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC0.72□□□□□ -2.29
SYNE1Q8NF91 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC0.72□□□□□ -2.29
SYNE1Q8NF91 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC0.72□□□□□ -2.29
SYNE1Q8NF91 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC0.72□□□□□ -2.29
SYNE1Q8NF91 METTL21EP-201ENST00000298105 713 ntBASIC0.72□□□□□ -2.29
SYNE1Q8NF91 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC0.72□□□□□ -2.29
SYNE1Q8NF91 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC0.72□□□□□ -2.29
SYNE1Q8NF91 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC0.72□□□□□ -2.29
SYNE1Q8NF91 RNA5SP498-201ENST00000411342 120 ntBASIC0.72□□□□□ -2.29
SYNE1Q8NF91 AC080125.1-201ENST00000414888 684 ntBASIC0.72□□□□□ -2.29
SYNE1Q8NF91 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC0.72□□□□□ -2.29
SYNE1Q8NF91 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC0.72□□□□□ -2.29
SYNE1Q8NF91 MRPL50P4-201ENST00000446432 475 ntBASIC0.72□□□□□ -2.29
SYNE1Q8NF91 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC0.72□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms