Protein–RNA interactions for Protein: Q9UHB6

LIMA1, LIM domain and actin-binding protein 1, humanhuman

Known RBP Predictions only

Length 759 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1Q9UHB6 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.98□□□□□ -1.77
LIMA1Q9UHB6 AC114755.5-201ENST00000447760 831 ntBASIC3.98□□□□□ -1.77
LIMA1Q9UHB6 ART2BP-201ENST00000453501 499 ntBASIC3.98□□□□□ -1.77
LIMA1Q9UHB6 ANP32BP2-201ENST00000454525 545 ntBASIC3.98□□□□□ -1.77
LIMA1Q9UHB6 ARPC3P2-201ENST00000457786 533 ntBASIC3.98□□□□□ -1.77
LIMA1Q9UHB6 AC026979.1-201ENST00000492525 396 ntBASIC3.98□□□□□ -1.77
LIMA1Q9UHB6 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.98□□□□□ -1.77
LIMA1Q9UHB6 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.98□□□□□ -1.77
LIMA1Q9UHB6 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
LIMA1Q9UHB6 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC3.98□□□□□ -1.77
LIMA1Q9UHB6 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC3.98□□□□□ -1.77
LIMA1Q9UHB6 MRPS36P5-201ENST00000551909 298 ntBASIC3.98□□□□□ -1.77
LIMA1Q9UHB6 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.98□□□□□ -1.77
LIMA1Q9UHB6 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.98□□□□□ -1.77
LIMA1Q9UHB6 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.98□□□□□ -1.77
LIMA1Q9UHB6 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.98□□□□□ -1.77
LIMA1Q9UHB6 AL365503.1-201ENST00000605247 905 ntBASIC3.98□□□□□ -1.77
LIMA1Q9UHB6 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.98□□□□□ -1.77
LIMA1Q9UHB6 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC3.98□□□□□ -1.77
LIMA1Q9UHB6 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.98□□□□□ -1.77
LIMA1Q9UHB6 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
LIMA1Q9UHB6 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.97□□□□□ -1.77
LIMA1Q9UHB6 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.97□□□□□ -1.77
LIMA1Q9UHB6 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.97□□□□□ -1.77
LIMA1Q9UHB6 SPRR2C-201ENST00000290702 219 ntBASIC3.97□□□□□ -1.77
LIMA1Q9UHB6 RNU6-289P-201ENST00000364093 107 ntBASIC3.97□□□□□ -1.77
LIMA1Q9UHB6 RNU6-777P-201ENST00000364265 104 ntBASIC3.97□□□□□ -1.77
LIMA1Q9UHB6 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.97□□□□□ -1.77
LIMA1Q9UHB6 RPL7P60-201ENST00000397636 735 ntBASIC3.97□□□□□ -1.77
LIMA1Q9UHB6 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.97□□□□□ -1.77
LIMA1Q9UHB6 TEX41-202ENST00000414256 604 ntTSL 5 BASIC3.97□□□□□ -1.77
LIMA1Q9UHB6 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.97□□□□□ -1.77
LIMA1Q9UHB6 DNAJA1P2-201ENST00000421360 1197 ntBASIC3.97□□□□□ -1.77
LIMA1Q9UHB6 AL158071.1-201ENST00000430315 461 ntBASIC3.97□□□□□ -1.77
LIMA1Q9UHB6 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC3.97□□□□□ -1.77
LIMA1Q9UHB6 UBE2D3P1-201ENST00000436669 444 ntBASIC3.97□□□□□ -1.77
LIMA1Q9UHB6 TRIM60P9Y-201ENST00000438459 816 ntBASIC3.97□□□□□ -1.77
LIMA1Q9UHB6 TRIM60P11Y-201ENST00000445313 801 ntBASIC3.97□□□□□ -1.77
LIMA1Q9UHB6 RPL7P52-201ENST00000449200 742 ntBASIC3.97□□□□□ -1.77
LIMA1Q9UHB6 HMGB1P15-201ENST00000453854 435 ntBASIC3.97□□□□□ -1.77
LIMA1Q9UHB6 AC004801.2-202ENST00000463559 283 ntBASIC3.97□□□□□ -1.77
LIMA1Q9UHB6 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.97□□□□□ -1.77
LIMA1Q9UHB6 AP000563.1-201ENST00000490865 758 ntBASIC3.97□□□□□ -1.77
LIMA1Q9UHB6 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC3.97□□□□□ -1.77
LIMA1Q9UHB6 AC005921.1-201ENST00000510589 286 ntBASIC3.97□□□□□ -1.77
LIMA1Q9UHB6 LTV1P1-201ENST00000510683 1237 ntBASIC3.97□□□□□ -1.77
LIMA1Q9UHB6 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.97□□□□□ -1.77
LIMA1Q9UHB6 AC024589.1-201ENST00000512207 263 ntBASIC3.97□□□□□ -1.77
LIMA1Q9UHB6 AC023141.12-201ENST00000512399 199 ntBASIC3.97□□□□□ -1.77
LIMA1Q9UHB6 AC093677.1-201ENST00000514414 678 ntBASIC3.97□□□□□ -1.77
LIMA1Q9UHB6 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.97□□□□□ -1.77
LIMA1Q9UHB6 AC091515.1-201ENST00000548110 679 ntBASIC3.97□□□□□ -1.77
LIMA1Q9UHB6 AC126177.3-201ENST00000551839 688 ntBASIC3.97□□□□□ -1.77
LIMA1Q9UHB6 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.97□□□□□ -1.77
LIMA1Q9UHB6 SETP7-201ENST00000552169 453 ntBASIC3.97□□□□□ -1.77
LIMA1Q9UHB6 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.97□□□□□ -1.77
LIMA1Q9UHB6 AC087499.8-201ENST00000578406 226 ntBASIC3.97□□□□□ -1.77
LIMA1Q9UHB6 MIR5187-201ENST00000583479 76 ntBASIC3.97□□□□□ -1.77
LIMA1Q9UHB6 XIAPP1-201ENST00000603162 600 ntBASIC3.97□□□□□ -1.77
LIMA1Q9UHB6 AC012669.1-201ENST00000603209 283 ntBASIC3.97□□□□□ -1.77
LIMA1Q9UHB6 AC006077.1-201ENST00000604746 343 ntBASIC3.97□□□□□ -1.77
LIMA1Q9UHB6 AC004908.3-201ENST00000610248 625 ntBASIC3.97□□□□□ -1.77
LIMA1Q9UHB6 AC023043.4-201ENST00000612081 449 ntBASIC3.97□□□□□ -1.77
LIMA1Q9UHB6 AL592295.2-201ENST00000612578 206 ntBASIC3.97□□□□□ -1.77
LIMA1Q9UHB6 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.97□□□□□ -1.77
LIMA1Q9UHB6 AC006338.2-201ENST00000616864 791 ntBASIC3.97□□□□□ -1.77
LIMA1Q9UHB6 AL031667.3-201ENST00000620124 655 ntBASIC3.97□□□□□ -1.77
LIMA1Q9UHB6 AC022149.2-201ENST00000621061 203 ntBASIC3.97□□□□□ -1.77
LIMA1Q9UHB6 RNA5SP196-201ENST00000625967 102 ntBASIC3.97□□□□□ -1.77
LIMA1Q9UHB6 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
LIMA1Q9UHB6 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.96□□□□□ -1.77
LIMA1Q9UHB6 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
LIMA1Q9UHB6 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
LIMA1Q9UHB6 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
LIMA1Q9UHB6 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.96□□□□□ -1.78
LIMA1Q9UHB6 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
LIMA1Q9UHB6 SNORA7.2-201ENST00000364446 145 ntBASIC3.96□□□□□ -1.78
LIMA1Q9UHB6 Y_RNA.302-201ENST00000364997 102 ntBASIC3.96□□□□□ -1.78
LIMA1Q9UHB6 RNA5SP88-201ENST00000365560 109 ntBASIC3.96□□□□□ -1.78
LIMA1Q9UHB6 RNU6-723P-201ENST00000383973 107 ntBASIC3.96□□□□□ -1.78
LIMA1Q9UHB6 MIR30B-201ENST00000384850 88 ntBASIC3.96□□□□□ -1.78
LIMA1Q9UHB6 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
LIMA1Q9UHB6 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
LIMA1Q9UHB6 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC3.96□□□□□ -1.78
LIMA1Q9UHB6 COX6CP17-201ENST00000421389 185 ntBASIC3.96□□□□□ -1.78
LIMA1Q9UHB6 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.96□□□□□ -1.78
LIMA1Q9UHB6 C4BPAP2-201ENST00000428434 478 ntBASIC3.96□□□□□ -1.78
LIMA1Q9UHB6 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC3.96□□□□□ -1.78
LIMA1Q9UHB6 MTND4LP10-201ENST00000435146 291 ntBASIC3.96□□□□□ -1.78
LIMA1Q9UHB6 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.96□□□□□ -1.78
LIMA1Q9UHB6 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC3.96□□□□□ -1.78
LIMA1Q9UHB6 OR6C5P-201ENST00000452388 923 ntBASIC3.96□□□□□ -1.78
LIMA1Q9UHB6 AL133162.1-201ENST00000463228 453 ntBASIC3.96□□□□□ -1.78
LIMA1Q9UHB6 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.96□□□□□ -1.78
LIMA1Q9UHB6 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC3.96□□□□□ -1.78
LIMA1Q9UHB6 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC3.96□□□□□ -1.78
LIMA1Q9UHB6 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.96□□□□□ -1.78
LIMA1Q9UHB6 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC3.96□□□□□ -1.78
LIMA1Q9UHB6 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC3.96□□□□□ -1.78
LIMA1Q9UHB6 RN7SKP60-201ENST00000516985 239 ntBASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms