Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 AC006517.1-201ENST00000480485 328 ntBASIC4.68□□□□□ -1.66
CDK5RAP3Q96JB5 AC023424.2-201ENST00000493479 777 ntBASIC4.68□□□□□ -1.66
CDK5RAP3Q96JB5 OR5H5P-201ENST00000503164 928 ntBASIC4.68□□□□□ -1.66
CDK5RAP3Q96JB5 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.68□□□□□ -1.66
CDK5RAP3Q96JB5 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC4.68□□□□□ -1.66
CDK5RAP3Q96JB5 AC093853.1-201ENST00000515689 483 ntBASIC4.68□□□□□ -1.66
CDK5RAP3Q96JB5 RNU6-720P-201ENST00000516363 108 ntBASIC4.68□□□□□ -1.66
CDK5RAP3Q96JB5 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.68□□□□□ -1.66
CDK5RAP3Q96JB5 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.68□□□□□ -1.66
CDK5RAP3Q96JB5 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC4.68□□□□□ -1.66
CDK5RAP3Q96JB5 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.68□□□□□ -1.66
CDK5RAP3Q96JB5 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.68□□□□□ -1.66
CDK5RAP3Q96JB5 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC4.68□□□□□ -1.66
CDK5RAP3Q96JB5 AC023575.1-201ENST00000580510 358 ntBASIC4.68□□□□□ -1.66
CDK5RAP3Q96JB5 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC4.68□□□□□ -1.66
CDK5RAP3Q96JB5 AC091805.2-201ENST00000603848 235 ntBASIC4.68□□□□□ -1.66
CDK5RAP3Q96JB5 AC112191.3-201ENST00000604371 277 ntBASIC4.68□□□□□ -1.66
CDK5RAP3Q96JB5 AC004492.1-201ENST00000607036 742 ntBASIC4.68□□□□□ -1.66
CDK5RAP3Q96JB5 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC4.68□□□□□ -1.66
CDK5RAP3Q96JB5 AC104010.1-201ENST00000616889 150 ntBASIC4.68□□□□□ -1.66
CDK5RAP3Q96JB5 C2orf27A-204ENST00000623058 969 ntBASIC4.68□□□□□ -1.66
CDK5RAP3Q96JB5 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC4.68□□□□□ -1.66
CDK5RAP3Q96JB5 AL359740.1-201ENST00000624340 592 ntBASIC4.68□□□□□ -1.66
CDK5RAP3Q96JB5 AC008725.1-201ENST00000605123 2263 ntBASIC4.68□□□□□ -1.66
CDK5RAP3Q96JB5 AL049780.3-201ENST00000624612 1583 ntBASIC4.68□□□□□ -1.66
CDK5RAP3Q96JB5 DPY19L2P2-203ENST00000435536 1858 ntBASIC4.68□□□□□ -1.66
CDK5RAP3Q96JB5 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.68□□□□□ -1.66
CDK5RAP3Q96JB5 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.68□□□□□ -1.66
CDK5RAP3Q96JB5 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
CDK5RAP3Q96JB5 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
CDK5RAP3Q96JB5 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CDK5RAP3Q96JB5 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.67□□□□□ -1.66
CDK5RAP3Q96JB5 MIR448-201ENST00000362131 111 ntBASIC4.67□□□□□ -1.66
CDK5RAP3Q96JB5 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CDK5RAP3Q96JB5 RNU6-648P-201ENST00000410190 107 ntBASIC4.67□□□□□ -1.66
CDK5RAP3Q96JB5 AL160275.2-201ENST00000412010 394 ntBASIC4.67□□□□□ -1.66
CDK5RAP3Q96JB5 FAR2P2-201ENST00000413041 594 ntBASIC4.67□□□□□ -1.66
CDK5RAP3Q96JB5 CYP4F29P-201ENST00000420685 446 ntBASIC4.67□□□□□ -1.66
CDK5RAP3Q96JB5 TEX41-204ENST00000423031 491 ntTSL 4 BASIC4.67□□□□□ -1.66
CDK5RAP3Q96JB5 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CDK5RAP3Q96JB5 FAR2P4-202ENST00000425399 584 ntBASIC4.67□□□□□ -1.66
CDK5RAP3Q96JB5 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC4.67□□□□□ -1.66
CDK5RAP3Q96JB5 OR5BE1P-201ENST00000425977 939 ntBASIC4.67□□□□□ -1.66
CDK5RAP3Q96JB5 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC4.67□□□□□ -1.66
CDK5RAP3Q96JB5 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.67□□□□□ -1.66
CDK5RAP3Q96JB5 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC4.67□□□□□ -1.66
CDK5RAP3Q96JB5 AL022238.1-201ENST00000442557 355 ntBASIC4.67□□□□□ -1.66
CDK5RAP3Q96JB5 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.67□□□□□ -1.66
CDK5RAP3Q96JB5 RPL7P52-201ENST00000449200 742 ntBASIC4.67□□□□□ -1.66
CDK5RAP3Q96JB5 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.67□□□□□ -1.66
CDK5RAP3Q96JB5 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC4.67□□□□□ -1.66
CDK5RAP3Q96JB5 AL033528.1-201ENST00000453780 140 ntBASIC4.67□□□□□ -1.66
CDK5RAP3Q96JB5 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.67□□□□□ -1.66
CDK5RAP3Q96JB5 SNORD42A-201ENST00000459584 64 ntBASIC4.67□□□□□ -1.66
CDK5RAP3Q96JB5 AC105137.1-201ENST00000484355 562 ntBASIC4.67□□□□□ -1.66
CDK5RAP3Q96JB5 AC091167.1-201ENST00000492017 396 ntBASIC4.67□□□□□ -1.66
CDK5RAP3Q96JB5 AC034222.1-201ENST00000494052 532 ntBASIC4.67□□□□□ -1.66
CDK5RAP3Q96JB5 AC106872.2-201ENST00000494303 480 ntBASIC4.67□□□□□ -1.66
CDK5RAP3Q96JB5 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CDK5RAP3Q96JB5 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC4.67□□□□□ -1.66
CDK5RAP3Q96JB5 TXNP6-201ENST00000510190 310 ntBASIC4.67□□□□□ -1.66
CDK5RAP3Q96JB5 AC108064.1-201ENST00000513791 460 ntBASIC4.67□□□□□ -1.66
CDK5RAP3Q96JB5 AC099522.1-202ENST00000514718 367 ntBASIC4.67□□□□□ -1.66
CDK5RAP3Q96JB5 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC4.67□□□□□ -1.66
CDK5RAP3Q96JB5 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC4.67□□□□□ -1.66
CDK5RAP3Q96JB5 ZDHHC20P3-201ENST00000531576 336 ntBASIC4.67□□□□□ -1.66
CDK5RAP3Q96JB5 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.67□□□□□ -1.66
CDK5RAP3Q96JB5 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.67□□□□□ -1.66
CDK5RAP3Q96JB5 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.67□□□□□ -1.66
CDK5RAP3Q96JB5 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC4.67□□□□□ -1.66
CDK5RAP3Q96JB5 AC107954.1-201ENST00000565906 727 ntBASIC4.67□□□□□ -1.66
CDK5RAP3Q96JB5 MIR4528-201ENST00000577763 90 ntBASIC4.67□□□□□ -1.66
CDK5RAP3Q96JB5 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.67□□□□□ -1.66
CDK5RAP3Q96JB5 AL353997.4-201ENST00000586196 166 ntBASIC4.67□□□□□ -1.66
CDK5RAP3Q96JB5 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.67□□□□□ -1.66
CDK5RAP3Q96JB5 MIR6748-201ENST00000610433 71 ntBASIC4.67□□□□□ -1.66
CDK5RAP3Q96JB5 AC064801.1-201ENST00000612025 407 ntBASIC4.67□□□□□ -1.66
CDK5RAP3Q96JB5 AC008498.1-201ENST00000613012 531 ntBASIC4.67□□□□□ -1.66
CDK5RAP3Q96JB5 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC4.67□□□□□ -1.66
CDK5RAP3Q96JB5 OR5BE1P-202ENST00000641168 1176 ntBASIC4.67□□□□□ -1.66
CDK5RAP3Q96JB5 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
CDK5RAP3Q96JB5 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CDK5RAP3Q96JB5 IQCB2P-201ENST00000401788 1633 ntBASIC4.67□□□□□ -1.66
CDK5RAP3Q96JB5 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CDK5RAP3Q96JB5 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
CDK5RAP3Q96JB5 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.67□□□□□ -1.66
CDK5RAP3Q96JB5 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.66□□□□□ -1.66
CDK5RAP3Q96JB5 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC4.66□□□□□ -1.66
CDK5RAP3Q96JB5 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
CDK5RAP3Q96JB5 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CDK5RAP3Q96JB5 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CDK5RAP3Q96JB5 RNU6-1042P-201ENST00000384204 107 ntBASIC4.66□□□□□ -1.66
CDK5RAP3Q96JB5 Y_RNA.493-201ENST00000384422 102 ntBASIC4.66□□□□□ -1.66
CDK5RAP3Q96JB5 RNU6-297P-201ENST00000384636 107 ntBASIC4.66□□□□□ -1.66
CDK5RAP3Q96JB5 AL356421.1-201ENST00000403255 413 ntBASIC4.66□□□□□ -1.66
CDK5RAP3Q96JB5 AF274854.1-201ENST00000413236 615 ntBASIC4.66□□□□□ -1.66
CDK5RAP3Q96JB5 AIMP1P1-201ENST00000418670 937 ntBASIC4.66□□□□□ -1.66
CDK5RAP3Q96JB5 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC4.66□□□□□ -1.66
CDK5RAP3Q96JB5 OR8F1P-201ENST00000425243 930 ntBASIC4.66□□□□□ -1.66
CDK5RAP3Q96JB5 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms