Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 RNU2-62P-201ENST00000410868 191 ntBASIC4.31□□□□□ -1.72
RNF220Q5VTB9 RNU6-195P-201ENST00000411352 109 ntBASIC4.31□□□□□ -1.72
RNF220Q5VTB9 AC127391.1-201ENST00000411737 98 ntBASIC4.31□□□□□ -1.72
RNF220Q5VTB9 DPPA2P3-201ENST00000411853 655 ntBASIC4.31□□□□□ -1.72
RNF220Q5VTB9 AL031779.1-201ENST00000415663 330 ntBASIC4.31□□□□□ -1.72
RNF220Q5VTB9 COX6B1P1-201ENST00000415962 213 ntBASIC4.31□□□□□ -1.72
RNF220Q5VTB9 MTCO1P21-201ENST00000416634 589 ntBASIC4.31□□□□□ -1.72
RNF220Q5VTB9 AC119751.6-201ENST00000416712 186 ntBASIC4.31□□□□□ -1.72
RNF220Q5VTB9 BX295541.1-201ENST00000417774 250 ntBASIC4.31□□□□□ -1.72
RNF220Q5VTB9 AC068287.1-201ENST00000430283 295 ntBASIC4.31□□□□□ -1.72
RNF220Q5VTB9 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.31□□□□□ -1.72
RNF220Q5VTB9 AL627308.1-201ENST00000435693 821 ntBASIC4.31□□□□□ -1.72
RNF220Q5VTB9 Z74696.2-201ENST00000436514 498 ntBASIC4.31□□□□□ -1.72
RNF220Q5VTB9 ELOCP30-201ENST00000447108 299 ntBASIC4.31□□□□□ -1.72
RNF220Q5VTB9 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.31□□□□□ -1.72
RNF220Q5VTB9 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.31□□□□□ -1.72
RNF220Q5VTB9 RPL7P16-201ENST00000479738 738 ntBASIC4.31□□□□□ -1.72
RNF220Q5VTB9 AC105252.1-201ENST00000503089 286 ntBASIC4.31□□□□□ -1.72
RNF220Q5VTB9 KCTD9P5-201ENST00000504141 1170 ntBASIC4.31□□□□□ -1.72
RNF220Q5VTB9 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.31□□□□□ -1.72
RNF220Q5VTB9 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC4.31□□□□□ -1.72
RNF220Q5VTB9 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.31□□□□□ -1.72
RNF220Q5VTB9 KLHL2P1-201ENST00000508691 521 ntBASIC4.31□□□□□ -1.72
RNF220Q5VTB9 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.31□□□□□ -1.72
RNF220Q5VTB9 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC4.31□□□□□ -1.72
RNF220Q5VTB9 DEFB108D-201ENST00000527787 222 ntBASIC4.31□□□□□ -1.72
RNF220Q5VTB9 AC109635.4-202ENST00000531666 412 ntBASIC4.31□□□□□ -1.72
RNF220Q5VTB9 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC4.31□□□□□ -1.72
RNF220Q5VTB9 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.31□□□□□ -1.72
RNF220Q5VTB9 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.31□□□□□ -1.72
RNF220Q5VTB9 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC4.31□□□□□ -1.72
RNF220Q5VTB9 AL133153.1-201ENST00000557756 303 ntBASIC4.31□□□□□ -1.72
RNF220Q5VTB9 AC009117.1-201ENST00000563948 554 ntBASIC4.31□□□□□ -1.72
RNF220Q5VTB9 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC4.31□□□□□ -1.72
RNF220Q5VTB9 AC006270.2-201ENST00000578523 652 ntBASIC4.31□□□□□ -1.72
RNF220Q5VTB9 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC4.31□□□□□ -1.72
RNF220Q5VTB9 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC4.31□□□□□ -1.72
RNF220Q5VTB9 AL022099.1-201ENST00000604551 712 ntBASIC4.31□□□□□ -1.72
RNF220Q5VTB9 AL034351.1-201ENST00000605288 668 ntBASIC4.31□□□□□ -1.72
RNF220Q5VTB9 AL133173.2-201ENST00000614270 90 ntBASIC4.31□□□□□ -1.72
RNF220Q5VTB9 AL450472.3-201ENST00000615578 367 ntBASIC4.31□□□□□ -1.72
RNF220Q5VTB9 uc_338.12-201ENST00000616344 181 ntBASIC4.31□□□□□ -1.72
RNF220Q5VTB9 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.31□□□□□ -1.72
RNF220Q5VTB9 AC019226.1-201ENST00000625666 515 ntBASIC4.31□□□□□ -1.72
RNF220Q5VTB9 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
RNF220Q5VTB9 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
RNF220Q5VTB9 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.31□□□□□ -1.72
RNF220Q5VTB9 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
RNF220Q5VTB9 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
RNF220Q5VTB9 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
RNF220Q5VTB9 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.3□□□□□ -1.72
RNF220Q5VTB9 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.3□□□□□ -1.72
RNF220Q5VTB9 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
RNF220Q5VTB9 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
RNF220Q5VTB9 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.3□□□□□ -1.72
RNF220Q5VTB9 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
RNF220Q5VTB9 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.3□□□□□ -1.72
RNF220Q5VTB9 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
RNF220Q5VTB9 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.3□□□□□ -1.72
RNF220Q5VTB9 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
RNF220Q5VTB9 RN7SKP44-201ENST00000363602 316 ntBASIC4.3□□□□□ -1.72
RNF220Q5VTB9 SNORA74A-201ENST00000364089 198 ntBASIC4.3□□□□□ -1.72
RNF220Q5VTB9 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
RNF220Q5VTB9 MIR323B-201ENST00000385269 82 ntBASIC4.3□□□□□ -1.72
RNF220Q5VTB9 RNA5SP113-201ENST00000410486 84 ntBASIC4.3□□□□□ -1.72
RNF220Q5VTB9 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC4.3□□□□□ -1.72
RNF220Q5VTB9 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.3□□□□□ -1.72
RNF220Q5VTB9 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4.3□□□□□ -1.72
RNF220Q5VTB9 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC4.3□□□□□ -1.72
RNF220Q5VTB9 PIGFP2-201ENST00000421400 651 ntBASIC4.3□□□□□ -1.72
RNF220Q5VTB9 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC4.3□□□□□ -1.72
RNF220Q5VTB9 RPL23AP38-201ENST00000423801 469 ntBASIC4.3□□□□□ -1.72
RNF220Q5VTB9 AC019097.1-201ENST00000424783 735 ntBASIC4.3□□□□□ -1.72
RNF220Q5VTB9 AC104651.1-201ENST00000427559 735 ntBASIC4.3□□□□□ -1.72
RNF220Q5VTB9 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.3□□□□□ -1.72
RNF220Q5VTB9 AC004866.2-201ENST00000438285 481 ntBASIC4.3□□□□□ -1.72
RNF220Q5VTB9 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC4.3□□□□□ -1.72
RNF220Q5VTB9 AC093156.1-201ENST00000440382 670 ntBASIC4.3□□□□□ -1.72
RNF220Q5VTB9 RPL21P89-201ENST00000444021 467 ntBASIC4.3□□□□□ -1.72
RNF220Q5VTB9 OR1H1P-201ENST00000448731 937 ntBASIC4.3□□□□□ -1.72
RNF220Q5VTB9 EIF4EBP2P1-201ENST00000450009 343 ntBASIC4.3□□□□□ -1.72
RNF220Q5VTB9 MTND1P12-201ENST00000455231 147 ntBASIC4.3□□□□□ -1.72
RNF220Q5VTB9 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC4.3□□□□□ -1.72
RNF220Q5VTB9 TMED11P-201ENST00000479478 690 ntBASIC4.3□□□□□ -1.72
RNF220Q5VTB9 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
RNF220Q5VTB9 AK3P4-201ENST00000504283 583 ntBASIC4.3□□□□□ -1.72
RNF220Q5VTB9 MLLT10P2-201ENST00000506434 249 ntBASIC4.3□□□□□ -1.72
RNF220Q5VTB9 NDUFB5P1-201ENST00000508134 564 ntBASIC4.3□□□□□ -1.72
RNF220Q5VTB9 AL592156.1-201ENST00000508758 304 ntBASIC4.3□□□□□ -1.72
RNF220Q5VTB9 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.3□□□□□ -1.72
RNF220Q5VTB9 FTH1P21-201ENST00000512179 511 ntBASIC4.3□□□□□ -1.72
RNF220Q5VTB9 AC110775.1-201ENST00000513721 462 ntBASIC4.3□□□□□ -1.72
RNF220Q5VTB9 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
RNF220Q5VTB9 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC4.3□□□□□ -1.72
RNF220Q5VTB9 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.3□□□□□ -1.72
RNF220Q5VTB9 DEFB108A-201ENST00000530110 222 ntBASIC4.3□□□□□ -1.72
RNF220Q5VTB9 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC4.3□□□□□ -1.72
RNF220Q5VTB9 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.3□□□□□ -1.72
RNF220Q5VTB9 AC105129.1-201ENST00000560250 297 ntBASIC4.3□□□□□ -1.72
RNF220Q5VTB9 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 126.1 ms