Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
PdfS4R2K0 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
PdfS4R2K0 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.39
PdfS4R2K0 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
PdfS4R2K0 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
PdfS4R2K0 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
PdfS4R2K0 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.39
PdfS4R2K0 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
PdfS4R2K0 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
PdfS4R2K0 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
PdfS4R2K0 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
PdfS4R2K0 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
PdfS4R2K0 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
PdfS4R2K0 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC12.58□□□□□ -0.4
PdfS4R2K0 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC12.58□□□□□ -0.4
PdfS4R2K0 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC12.58□□□□□ -0.4
PdfS4R2K0 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC12.58□□□□□ -0.4
PdfS4R2K0 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
PdfS4R2K0 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
PdfS4R2K0 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
PdfS4R2K0 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
PdfS4R2K0 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
PdfS4R2K0 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
PdfS4R2K0 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
PdfS4R2K0 Gm10812-201ENSMUST00000099864 546 ntBASIC12.58□□□□□ -0.4
PdfS4R2K0 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
PdfS4R2K0 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
PdfS4R2K0 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
PdfS4R2K0 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
PdfS4R2K0 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
PdfS4R2K0 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
PdfS4R2K0 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
PdfS4R2K0 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
PdfS4R2K0 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
PdfS4R2K0 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
PdfS4R2K0 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
PdfS4R2K0 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
PdfS4R2K0 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
PdfS4R2K0 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
PdfS4R2K0 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
PdfS4R2K0 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
PdfS4R2K0 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC12.57□□□□□ -0.4
PdfS4R2K0 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
PdfS4R2K0 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
PdfS4R2K0 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
PdfS4R2K0 Gm13158-201ENSMUST00000122007 736 ntBASIC12.57□□□□□ -0.4
PdfS4R2K0 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
PdfS4R2K0 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
PdfS4R2K0 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
PdfS4R2K0 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
PdfS4R2K0 Gm38285-201ENSMUST00000192928 922 ntBASIC12.57□□□□□ -0.4
PdfS4R2K0 Wnt10b-205ENSMUST00000226846 1204 ntBASIC12.57□□□□□ -0.4
PdfS4R2K0 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
PdfS4R2K0 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
PdfS4R2K0 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
PdfS4R2K0 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
PdfS4R2K0 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
PdfS4R2K0 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
PdfS4R2K0 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
PdfS4R2K0 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
PdfS4R2K0 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
PdfS4R2K0 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC12.56□□□□□ -0.4
PdfS4R2K0 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
PdfS4R2K0 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
PdfS4R2K0 Wnt10b-206ENSMUST00000228546 2709 ntBASIC12.56□□□□□ -0.4
PdfS4R2K0 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
PdfS4R2K0 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
PdfS4R2K0 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
PdfS4R2K0 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
PdfS4R2K0 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
PdfS4R2K0 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
PdfS4R2K0 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
PdfS4R2K0 Gm5643-201ENSMUST00000117081 966 ntBASIC12.56□□□□□ -0.4
PdfS4R2K0 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
PdfS4R2K0 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC12.56□□□□□ -0.4
PdfS4R2K0 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
PdfS4R2K0 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
PdfS4R2K0 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
PdfS4R2K0 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
PdfS4R2K0 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
PdfS4R2K0 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
PdfS4R2K0 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC12.56□□□□□ -0.4
PdfS4R2K0 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
PdfS4R2K0 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
PdfS4R2K0 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
PdfS4R2K0 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
PdfS4R2K0 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
PdfS4R2K0 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
PdfS4R2K0 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
PdfS4R2K0 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
PdfS4R2K0 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
PdfS4R2K0 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
PdfS4R2K0 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.4
PdfS4R2K0 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
PdfS4R2K0 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
PdfS4R2K0 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
PdfS4R2K0 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
PdfS4R2K0 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
PdfS4R2K0 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
PdfS4R2K0 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms