Protein–RNA interactions for Protein: Q9Z2V5

Hdac6, Histone deacetylase 6, mousemouse

Predictions only

Length 1,149 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac6Q9Z2V5 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hdac6Q9Z2V5 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hdac6Q9Z2V5 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC20.45■□□□□ 0.86
Hdac6Q9Z2V5 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Hdac6Q9Z2V5 AC174742.1-201ENSMUST00000218272 304 ntBASIC20.45■□□□□ 0.86
Hdac6Q9Z2V5 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hdac6Q9Z2V5 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Hdac6Q9Z2V5 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hdac6Q9Z2V5 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hdac6Q9Z2V5 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Hdac6Q9Z2V5 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
Hdac6Q9Z2V5 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC20.44■□□□□ 0.86
Hdac6Q9Z2V5 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Hdac6Q9Z2V5 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC20.44■□□□□ 0.86
Hdac6Q9Z2V5 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC20.44■□□□□ 0.86
Hdac6Q9Z2V5 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Hdac6Q9Z2V5 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Hdac6Q9Z2V5 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Hdac6Q9Z2V5 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC20.44■□□□□ 0.86
Hdac6Q9Z2V5 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
Hdac6Q9Z2V5 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Hdac6Q9Z2V5 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Hdac6Q9Z2V5 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Hdac6Q9Z2V5 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hdac6Q9Z2V5 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hdac6Q9Z2V5 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hdac6Q9Z2V5 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC20.43■□□□□ 0.86
Hdac6Q9Z2V5 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC20.43■□□□□ 0.86
Hdac6Q9Z2V5 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hdac6Q9Z2V5 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Hdac6Q9Z2V5 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Hdac6Q9Z2V5 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
Hdac6Q9Z2V5 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC20.43■□□□□ 0.86
Hdac6Q9Z2V5 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC20.43■□□□□ 0.86
Hdac6Q9Z2V5 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Hdac6Q9Z2V5 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC20.43■□□□□ 0.86
Hdac6Q9Z2V5 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hdac6Q9Z2V5 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hdac6Q9Z2V5 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hdac6Q9Z2V5 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hdac6Q9Z2V5 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Hdac6Q9Z2V5 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hdac6Q9Z2V5 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hdac6Q9Z2V5 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hdac6Q9Z2V5 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Hdac6Q9Z2V5 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Hdac6Q9Z2V5 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Hdac6Q9Z2V5 Gm4609-201ENSMUST00000106443 1002 ntBASIC20.42■□□□□ 0.86
Hdac6Q9Z2V5 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC20.42■□□□□ 0.86
Hdac6Q9Z2V5 Gm5138-201ENSMUST00000113842 1002 ntBASIC20.42■□□□□ 0.86
Hdac6Q9Z2V5 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
Hdac6Q9Z2V5 Gm15191-201ENSMUST00000117933 1000 ntBASIC20.42■□□□□ 0.86
Hdac6Q9Z2V5 Gm12182-201ENSMUST00000118655 1008 ntBASIC20.42■□□□□ 0.86
Hdac6Q9Z2V5 Gm13882-201ENSMUST00000120886 1002 ntBASIC20.42■□□□□ 0.86
Hdac6Q9Z2V5 Gm10284-201ENSMUST00000145057 1005 ntBASIC20.42■□□□□ 0.86
Hdac6Q9Z2V5 Gm10481-201ENSMUST00000179228 1002 ntBASIC20.42■□□□□ 0.86
Hdac6Q9Z2V5 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC20.42■□□□□ 0.86
Hdac6Q9Z2V5 Gm2574-201ENSMUST00000181051 1002 ntBASIC20.42■□□□□ 0.86
Hdac6Q9Z2V5 Gm3200-201ENSMUST00000181493 1002 ntBASIC20.42■□□□□ 0.86
Hdac6Q9Z2V5 Gm8825-201ENSMUST00000182565 998 ntBASIC20.42■□□□□ 0.86
Hdac6Q9Z2V5 Gm4518-201ENSMUST00000182638 718 ntBASIC20.42■□□□□ 0.86
Hdac6Q9Z2V5 Gm8330-201ENSMUST00000182754 1008 ntBASIC20.42■□□□□ 0.86
Hdac6Q9Z2V5 Gm4575-201ENSMUST00000182991 1002 ntBASIC20.42■□□□□ 0.86
Hdac6Q9Z2V5 Gm8709-201ENSMUST00000183230 1012 ntBASIC20.42■□□□□ 0.86
Hdac6Q9Z2V5 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
Hdac6Q9Z2V5 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Hdac6Q9Z2V5 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Hdac6Q9Z2V5 Gm10293-201ENSMUST00000076317 1002 ntBASIC20.42■□□□□ 0.86
Hdac6Q9Z2V5 Gm6316-201ENSMUST00000082064 1020 ntBASIC20.42■□□□□ 0.86
Hdac6Q9Z2V5 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Hdac6Q9Z2V5 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Hdac6Q9Z2V5 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Hdac6Q9Z2V5 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC20.42■□□□□ 0.86
Hdac6Q9Z2V5 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Hdac6Q9Z2V5 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Hdac6Q9Z2V5 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Hdac6Q9Z2V5 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Hdac6Q9Z2V5 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Hdac6Q9Z2V5 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Hdac6Q9Z2V5 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
Hdac6Q9Z2V5 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC20.41■□□□□ 0.86
Hdac6Q9Z2V5 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Hdac6Q9Z2V5 Auts2-212ENSMUST00000178555 309 ntBASIC20.41■□□□□ 0.86
Hdac6Q9Z2V5 Gm44945-201ENSMUST00000206764 1187 ntBASIC20.41■□□□□ 0.86
Hdac6Q9Z2V5 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC20.41■□□□□ 0.86
Hdac6Q9Z2V5 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Hdac6Q9Z2V5 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Hdac6Q9Z2V5 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC20.41■□□□□ 0.86
Hdac6Q9Z2V5 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Hdac6Q9Z2V5 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Hdac6Q9Z2V5 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Hdac6Q9Z2V5 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Hdac6Q9Z2V5 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC20.41■□□□□ 0.86
Hdac6Q9Z2V5 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Hdac6Q9Z2V5 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Hdac6Q9Z2V5 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Hdac6Q9Z2V5 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Hdac6Q9Z2V5 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Hdac6Q9Z2V5 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Hdac6Q9Z2V5 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms