Protein–RNA interactions for Protein: Q9WU84

Ccs, Copper chaperone for superoxide dismutase, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcsQ9WU84 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CcsQ9WU84 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
CcsQ9WU84 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CcsQ9WU84 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CcsQ9WU84 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CcsQ9WU84 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CcsQ9WU84 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
CcsQ9WU84 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CcsQ9WU84 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CcsQ9WU84 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CcsQ9WU84 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CcsQ9WU84 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC12.75□□□□□ -0.37
CcsQ9WU84 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
CcsQ9WU84 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CcsQ9WU84 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
CcsQ9WU84 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC12.75□□□□□ -0.37
CcsQ9WU84 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
CcsQ9WU84 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CcsQ9WU84 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CcsQ9WU84 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CcsQ9WU84 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CcsQ9WU84 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CcsQ9WU84 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
CcsQ9WU84 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CcsQ9WU84 Gm10812-201ENSMUST00000099864 546 ntBASIC12.75□□□□□ -0.37
CcsQ9WU84 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
CcsQ9WU84 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CcsQ9WU84 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CcsQ9WU84 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CcsQ9WU84 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
CcsQ9WU84 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CcsQ9WU84 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CcsQ9WU84 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
CcsQ9WU84 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CcsQ9WU84 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CcsQ9WU84 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CcsQ9WU84 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CcsQ9WU84 Idnk-204ENSMUST00000226010 1898 ntBASIC12.74□□□□□ -0.37
CcsQ9WU84 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CcsQ9WU84 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CcsQ9WU84 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CcsQ9WU84 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CcsQ9WU84 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CcsQ9WU84 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CcsQ9WU84 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
CcsQ9WU84 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
CcsQ9WU84 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CcsQ9WU84 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
CcsQ9WU84 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
CcsQ9WU84 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
CcsQ9WU84 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CcsQ9WU84 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC12.74□□□□□ -0.37
CcsQ9WU84 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC12.74□□□□□ -0.37
CcsQ9WU84 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CcsQ9WU84 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC12.74□□□□□ -0.37
CcsQ9WU84 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
CcsQ9WU84 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC12.74□□□□□ -0.37
CcsQ9WU84 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CcsQ9WU84 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CcsQ9WU84 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
CcsQ9WU84 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CcsQ9WU84 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
CcsQ9WU84 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
CcsQ9WU84 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
CcsQ9WU84 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
CcsQ9WU84 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CcsQ9WU84 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
CcsQ9WU84 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
CcsQ9WU84 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
CcsQ9WU84 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CcsQ9WU84 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
CcsQ9WU84 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
CcsQ9WU84 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CcsQ9WU84 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CcsQ9WU84 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CcsQ9WU84 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC12.73□□□□□ -0.37
CcsQ9WU84 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC12.73□□□□□ -0.37
CcsQ9WU84 Gm13158-201ENSMUST00000122007 736 ntBASIC12.73□□□□□ -0.37
CcsQ9WU84 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC12.73□□□□□ -0.37
CcsQ9WU84 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CcsQ9WU84 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CcsQ9WU84 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC12.73□□□□□ -0.37
CcsQ9WU84 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CcsQ9WU84 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CcsQ9WU84 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CcsQ9WU84 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CcsQ9WU84 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CcsQ9WU84 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CcsQ9WU84 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CcsQ9WU84 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CcsQ9WU84 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC12.73□□□□□ -0.37
CcsQ9WU84 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CcsQ9WU84 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC12.72□□□□□ -0.37
CcsQ9WU84 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
CcsQ9WU84 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
CcsQ9WU84 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC12.72□□□□□ -0.37
CcsQ9WU84 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CcsQ9WU84 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC12.72□□□□□ -0.37
CcsQ9WU84 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CcsQ9WU84 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms