Protein–RNA interactions for Protein: Q9QY14

Foxe3, Forkhead box protein E3, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxe3Q9QY14 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Foxe3Q9QY14 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Foxe3Q9QY14 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Foxe3Q9QY14 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.33■□□□□ 0.37
Foxe3Q9QY14 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.33■□□□□ 0.37
Foxe3Q9QY14 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Foxe3Q9QY14 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Foxe3Q9QY14 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Foxe3Q9QY14 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Foxe3Q9QY14 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Foxe3Q9QY14 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Foxe3Q9QY14 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Foxe3Q9QY14 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Foxe3Q9QY14 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC17.33■□□□□ 0.36
Foxe3Q9QY14 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC17.33■□□□□ 0.36
Foxe3Q9QY14 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
Foxe3Q9QY14 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC17.33■□□□□ 0.36
Foxe3Q9QY14 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Foxe3Q9QY14 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Foxe3Q9QY14 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Foxe3Q9QY14 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Foxe3Q9QY14 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Foxe3Q9QY14 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Foxe3Q9QY14 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Foxe3Q9QY14 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Foxe3Q9QY14 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Foxe3Q9QY14 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Foxe3Q9QY14 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Foxe3Q9QY14 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC17.32■□□□□ 0.36
Foxe3Q9QY14 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Foxe3Q9QY14 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC17.32■□□□□ 0.36
Foxe3Q9QY14 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Foxe3Q9QY14 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
Foxe3Q9QY14 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Foxe3Q9QY14 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Foxe3Q9QY14 Gm7229-201ENSMUST00000214719 1007 ntBASIC17.32■□□□□ 0.36
Foxe3Q9QY14 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Foxe3Q9QY14 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Foxe3Q9QY14 Gm15500-202ENSMUST00000071641 1019 ntBASIC17.32■□□□□ 0.36
Foxe3Q9QY14 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Foxe3Q9QY14 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Foxe3Q9QY14 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Foxe3Q9QY14 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Foxe3Q9QY14 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Foxe3Q9QY14 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Foxe3Q9QY14 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Foxe3Q9QY14 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Foxe3Q9QY14 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC17.31■□□□□ 0.36
Foxe3Q9QY14 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Foxe3Q9QY14 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC17.31■□□□□ 0.36
Foxe3Q9QY14 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.31■□□□□ 0.36
Foxe3Q9QY14 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC17.31■□□□□ 0.36
Foxe3Q9QY14 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Foxe3Q9QY14 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Foxe3Q9QY14 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Foxe3Q9QY14 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Foxe3Q9QY14 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Foxe3Q9QY14 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Foxe3Q9QY14 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Foxe3Q9QY14 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Foxe3Q9QY14 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Foxe3Q9QY14 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Foxe3Q9QY14 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC17.3■□□□□ 0.36
Foxe3Q9QY14 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC17.3■□□□□ 0.36
Foxe3Q9QY14 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC17.3■□□□□ 0.36
Foxe3Q9QY14 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC17.3■□□□□ 0.36
Foxe3Q9QY14 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Foxe3Q9QY14 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Foxe3Q9QY14 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Foxe3Q9QY14 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Foxe3Q9QY14 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Foxe3Q9QY14 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.3■□□□□ 0.36
Foxe3Q9QY14 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Foxe3Q9QY14 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Foxe3Q9QY14 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC17.3■□□□□ 0.36
Foxe3Q9QY14 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Foxe3Q9QY14 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Foxe3Q9QY14 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Foxe3Q9QY14 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Foxe3Q9QY14 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Foxe3Q9QY14 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Foxe3Q9QY14 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Foxe3Q9QY14 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Foxe3Q9QY14 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
Foxe3Q9QY14 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Foxe3Q9QY14 Gm4609-201ENSMUST00000106443 1002 ntBASIC17.29■□□□□ 0.36
Foxe3Q9QY14 Gm5138-201ENSMUST00000113842 1002 ntBASIC17.29■□□□□ 0.36
Foxe3Q9QY14 Gm15191-201ENSMUST00000117933 1000 ntBASIC17.29■□□□□ 0.36
Foxe3Q9QY14 Gm12182-201ENSMUST00000118655 1008 ntBASIC17.29■□□□□ 0.36
Foxe3Q9QY14 Gm13882-201ENSMUST00000120886 1002 ntBASIC17.29■□□□□ 0.36
Foxe3Q9QY14 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
Foxe3Q9QY14 Gm10284-201ENSMUST00000145057 1005 ntBASIC17.29■□□□□ 0.36
Foxe3Q9QY14 Gm2308-201ENSMUST00000166539 1004 ntBASIC17.29■□□□□ 0.36
Foxe3Q9QY14 Gm10481-201ENSMUST00000179228 1002 ntBASIC17.29■□□□□ 0.36
Foxe3Q9QY14 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Foxe3Q9QY14 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC17.29■□□□□ 0.36
Foxe3Q9QY14 Gm2574-201ENSMUST00000181051 1002 ntBASIC17.29■□□□□ 0.36
Foxe3Q9QY14 Gm3200-201ENSMUST00000181493 1002 ntBASIC17.29■□□□□ 0.36
Foxe3Q9QY14 Gm8825-201ENSMUST00000182565 998 ntBASIC17.29■□□□□ 0.36
Foxe3Q9QY14 Gm4518-201ENSMUST00000182638 718 ntBASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms