Protein–RNA interactions for Protein: Q9QXA5

Lsm4, U6 snRNA-associated Sm-like protein LSm4, mousemouse

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm4Q9QXA5 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Lsm4Q9QXA5 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Lsm4Q9QXA5 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lsm4Q9QXA5 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Lsm4Q9QXA5 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC12.95□□□□□ -0.34
Lsm4Q9QXA5 Gm18958-201ENSMUST00000174258 762 ntBASIC12.95□□□□□ -0.34
Lsm4Q9QXA5 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC12.95□□□□□ -0.34
Lsm4Q9QXA5 AC159205.3-201ENSMUST00000224614 874 ntBASIC12.95□□□□□ -0.34
Lsm4Q9QXA5 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lsm4Q9QXA5 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lsm4Q9QXA5 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC12.95□□□□□ -0.34
Lsm4Q9QXA5 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Lsm4Q9QXA5 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lsm4Q9QXA5 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lsm4Q9QXA5 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lsm4Q9QXA5 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lsm4Q9QXA5 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lsm4Q9QXA5 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
Lsm4Q9QXA5 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lsm4Q9QXA5 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC12.95□□□□□ -0.34
Lsm4Q9QXA5 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Lsm4Q9QXA5 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lsm4Q9QXA5 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lsm4Q9QXA5 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lsm4Q9QXA5 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lsm4Q9QXA5 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Lsm4Q9QXA5 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Lsm4Q9QXA5 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Lsm4Q9QXA5 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Lsm4Q9QXA5 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lsm4Q9QXA5 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lsm4Q9QXA5 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lsm4Q9QXA5 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lsm4Q9QXA5 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lsm4Q9QXA5 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lsm4Q9QXA5 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
Lsm4Q9QXA5 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC12.94□□□□□ -0.34
Lsm4Q9QXA5 Gm38027-201ENSMUST00000192315 235 ntBASIC12.94□□□□□ -0.34
Lsm4Q9QXA5 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lsm4Q9QXA5 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lsm4Q9QXA5 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lsm4Q9QXA5 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Lsm4Q9QXA5 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lsm4Q9QXA5 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
Lsm4Q9QXA5 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lsm4Q9QXA5 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Lsm4Q9QXA5 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lsm4Q9QXA5 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lsm4Q9QXA5 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lsm4Q9QXA5 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lsm4Q9QXA5 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lsm4Q9QXA5 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Lsm4Q9QXA5 Gm42473-201ENSMUST00000201056 2291 ntBASIC12.93□□□□□ -0.34
Lsm4Q9QXA5 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm4Q9QXA5 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Lsm4Q9QXA5 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC12.93□□□□□ -0.34
Lsm4Q9QXA5 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm4Q9QXA5 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm4Q9QXA5 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm4Q9QXA5 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm4Q9QXA5 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm4Q9QXA5 Prob1-201ENSMUST00000097619 3021 ntBASIC12.93□□□□□ -0.34
Lsm4Q9QXA5 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm4Q9QXA5 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm4Q9QXA5 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm4Q9QXA5 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC12.93□□□□□ -0.34
Lsm4Q9QXA5 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
Lsm4Q9QXA5 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm4Q9QXA5 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm4Q9QXA5 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Lsm4Q9QXA5 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm4Q9QXA5 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm4Q9QXA5 Ntrk2-205ENSMUST00000224402 2284 ntBASIC12.93□□□□□ -0.34
Lsm4Q9QXA5 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm4Q9QXA5 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm4Q9QXA5 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
Lsm4Q9QXA5 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm4Q9QXA5 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm4Q9QXA5 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm4Q9QXA5 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm4Q9QXA5 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
Lsm4Q9QXA5 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC12.93□□□□□ -0.34
Lsm4Q9QXA5 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC12.93□□□□□ -0.34
Lsm4Q9QXA5 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm4Q9QXA5 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Lsm4Q9QXA5 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm4Q9QXA5 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm4Q9QXA5 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm4Q9QXA5 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Lsm4Q9QXA5 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lsm4Q9QXA5 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Lsm4Q9QXA5 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lsm4Q9QXA5 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lsm4Q9QXA5 Ccdc166-201ENSMUST00000182172 2584 ntBASIC12.92□□□□□ -0.34
Lsm4Q9QXA5 Gfra2-202ENSMUST00000227633 1480 ntBASIC12.92□□□□□ -0.34
Lsm4Q9QXA5 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC12.92□□□□□ -0.34
Lsm4Q9QXA5 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC12.92□□□□□ -0.34
Lsm4Q9QXA5 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lsm4Q9QXA5 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lsm4Q9QXA5 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms