Protein–RNA interactions for Protein: Q9QWF0

Chaf1a, Chromatin assembly factor 1 subunit A, mousemouse

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1aQ9QWF0 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chaf1aQ9QWF0 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chaf1aQ9QWF0 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chaf1aQ9QWF0 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Chaf1aQ9QWF0 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chaf1aQ9QWF0 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chaf1aQ9QWF0 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chaf1aQ9QWF0 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chaf1aQ9QWF0 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chaf1aQ9QWF0 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chaf1aQ9QWF0 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Chaf1aQ9QWF0 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chaf1aQ9QWF0 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Chaf1aQ9QWF0 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Chaf1aQ9QWF0 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chaf1aQ9QWF0 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chaf1aQ9QWF0 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chaf1aQ9QWF0 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chaf1aQ9QWF0 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC18.34■□□□□ 0.53
Chaf1aQ9QWF0 Gm8520-201ENSMUST00000186517 868 ntBASIC18.34■□□□□ 0.53
Chaf1aQ9QWF0 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC18.34■□□□□ 0.53
Chaf1aQ9QWF0 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chaf1aQ9QWF0 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chaf1aQ9QWF0 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chaf1aQ9QWF0 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Chaf1aQ9QWF0 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chaf1aQ9QWF0 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Chaf1aQ9QWF0 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Chaf1aQ9QWF0 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chaf1aQ9QWF0 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC18.34■□□□□ 0.53
Chaf1aQ9QWF0 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Chaf1aQ9QWF0 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chaf1aQ9QWF0 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Chaf1aQ9QWF0 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Chaf1aQ9QWF0 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Chaf1aQ9QWF0 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Chaf1aQ9QWF0 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Chaf1aQ9QWF0 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Chaf1aQ9QWF0 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Chaf1aQ9QWF0 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Chaf1aQ9QWF0 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Chaf1aQ9QWF0 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Chaf1aQ9QWF0 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Chaf1aQ9QWF0 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Chaf1aQ9QWF0 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Chaf1aQ9QWF0 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Chaf1aQ9QWF0 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC18.33■□□□□ 0.52
Chaf1aQ9QWF0 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Chaf1aQ9QWF0 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC18.33■□□□□ 0.52
Chaf1aQ9QWF0 Gm3375-201ENSMUST00000203929 796 ntBASIC18.33■□□□□ 0.52
Chaf1aQ9QWF0 Arhgef4-208ENSMUST00000211073 171 ntBASIC18.33■□□□□ 0.52
Chaf1aQ9QWF0 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Chaf1aQ9QWF0 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Chaf1aQ9QWF0 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Chaf1aQ9QWF0 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Chaf1aQ9QWF0 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Chaf1aQ9QWF0 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Chaf1aQ9QWF0 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC18.33■□□□□ 0.52
Chaf1aQ9QWF0 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Chaf1aQ9QWF0 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Chaf1aQ9QWF0 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Chaf1aQ9QWF0 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Chaf1aQ9QWF0 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chaf1aQ9QWF0 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Chaf1aQ9QWF0 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Chaf1aQ9QWF0 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chaf1aQ9QWF0 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chaf1aQ9QWF0 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Chaf1aQ9QWF0 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
Chaf1aQ9QWF0 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Chaf1aQ9QWF0 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC18.32■□□□□ 0.52
Chaf1aQ9QWF0 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chaf1aQ9QWF0 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Chaf1aQ9QWF0 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chaf1aQ9QWF0 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
Chaf1aQ9QWF0 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC18.32■□□□□ 0.52
Chaf1aQ9QWF0 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC18.32■□□□□ 0.52
Chaf1aQ9QWF0 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC18.32■□□□□ 0.52
Chaf1aQ9QWF0 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Chaf1aQ9QWF0 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Chaf1aQ9QWF0 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chaf1aQ9QWF0 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Chaf1aQ9QWF0 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Chaf1aQ9QWF0 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Chaf1aQ9QWF0 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chaf1aQ9QWF0 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chaf1aQ9QWF0 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC18.31■□□□□ 0.52
Chaf1aQ9QWF0 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chaf1aQ9QWF0 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Chaf1aQ9QWF0 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chaf1aQ9QWF0 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chaf1aQ9QWF0 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Chaf1aQ9QWF0 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chaf1aQ9QWF0 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chaf1aQ9QWF0 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chaf1aQ9QWF0 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chaf1aQ9QWF0 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Chaf1aQ9QWF0 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chaf1aQ9QWF0 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Chaf1aQ9QWF0 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms