Protein–RNA interactions for Protein: Q9JIF7

Copb1, Coatomer subunit beta, mousemouse

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Copb1Q9JIF7 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Copb1Q9JIF7 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Copb1Q9JIF7 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Copb1Q9JIF7 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Copb1Q9JIF7 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Copb1Q9JIF7 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Copb1Q9JIF7 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Copb1Q9JIF7 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Copb1Q9JIF7 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Copb1Q9JIF7 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Copb1Q9JIF7 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Copb1Q9JIF7 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Copb1Q9JIF7 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Copb1Q9JIF7 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Copb1Q9JIF7 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Copb1Q9JIF7 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Copb1Q9JIF7 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC17.92■□□□□ 0.46
Copb1Q9JIF7 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Copb1Q9JIF7 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC17.92■□□□□ 0.46
Copb1Q9JIF7 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC17.92■□□□□ 0.46
Copb1Q9JIF7 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Copb1Q9JIF7 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC17.92■□□□□ 0.46
Copb1Q9JIF7 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC17.92■□□□□ 0.46
Copb1Q9JIF7 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Copb1Q9JIF7 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Copb1Q9JIF7 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Copb1Q9JIF7 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Copb1Q9JIF7 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Copb1Q9JIF7 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Copb1Q9JIF7 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Copb1Q9JIF7 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Copb1Q9JIF7 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Copb1Q9JIF7 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Copb1Q9JIF7 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Copb1Q9JIF7 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Copb1Q9JIF7 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Copb1Q9JIF7 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC17.91■□□□□ 0.46
Copb1Q9JIF7 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Copb1Q9JIF7 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Copb1Q9JIF7 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC17.91■□□□□ 0.46
Copb1Q9JIF7 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Copb1Q9JIF7 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Copb1Q9JIF7 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Copb1Q9JIF7 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Copb1Q9JIF7 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Copb1Q9JIF7 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
Copb1Q9JIF7 Arhgef33-211ENSMUST00000225658 473 ntBASIC17.91■□□□□ 0.46
Copb1Q9JIF7 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Copb1Q9JIF7 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Copb1Q9JIF7 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC17.91■□□□□ 0.46
Copb1Q9JIF7 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Copb1Q9JIF7 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Copb1Q9JIF7 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Copb1Q9JIF7 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Copb1Q9JIF7 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Copb1Q9JIF7 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Copb1Q9JIF7 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Copb1Q9JIF7 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Copb1Q9JIF7 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Copb1Q9JIF7 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Copb1Q9JIF7 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Copb1Q9JIF7 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Copb1Q9JIF7 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Copb1Q9JIF7 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Copb1Q9JIF7 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Copb1Q9JIF7 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Copb1Q9JIF7 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Copb1Q9JIF7 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Copb1Q9JIF7 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Copb1Q9JIF7 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Copb1Q9JIF7 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Copb1Q9JIF7 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC17.9■□□□□ 0.46
Copb1Q9JIF7 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Copb1Q9JIF7 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Copb1Q9JIF7 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC17.9■□□□□ 0.46
Copb1Q9JIF7 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Copb1Q9JIF7 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC17.9■□□□□ 0.46
Copb1Q9JIF7 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Copb1Q9JIF7 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Copb1Q9JIF7 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Copb1Q9JIF7 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Copb1Q9JIF7 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.46
Copb1Q9JIF7 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Copb1Q9JIF7 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC17.89■□□□□ 0.45
Copb1Q9JIF7 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Copb1Q9JIF7 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Copb1Q9JIF7 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Copb1Q9JIF7 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC17.89■□□□□ 0.45
Copb1Q9JIF7 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Copb1Q9JIF7 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Copb1Q9JIF7 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Copb1Q9JIF7 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC17.89■□□□□ 0.45
Copb1Q9JIF7 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Copb1Q9JIF7 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Copb1Q9JIF7 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Copb1Q9JIF7 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Copb1Q9JIF7 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Copb1Q9JIF7 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Copb1Q9JIF7 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Copb1Q9JIF7 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms