Protein–RNA interactions for Protein: Q9ER62

Tnfrsf22, Tumor necrosis factor receptor superfamily member 22, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf22Q9ER62 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Tnfrsf22Q9ER62 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tnfrsf22Q9ER62 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC15.3■□□□□ 0.04
Tnfrsf22Q9ER62 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Tnfrsf22Q9ER62 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Tnfrsf22Q9ER62 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Tnfrsf22Q9ER62 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tnfrsf22Q9ER62 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Tnfrsf22Q9ER62 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tnfrsf22Q9ER62 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC15.3■□□□□ 0.04
Tnfrsf22Q9ER62 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC15.3■□□□□ 0.04
Tnfrsf22Q9ER62 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC15.3■□□□□ 0.04
Tnfrsf22Q9ER62 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tnfrsf22Q9ER62 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tnfrsf22Q9ER62 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tnfrsf22Q9ER62 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tnfrsf22Q9ER62 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Tnfrsf22Q9ER62 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tnfrsf22Q9ER62 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tnfrsf22Q9ER62 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Tnfrsf22Q9ER62 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tnfrsf22Q9ER62 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Tnfrsf22Q9ER62 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tnfrsf22Q9ER62 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Tnfrsf22Q9ER62 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Tnfrsf22Q9ER62 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfrsf22Q9ER62 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfrsf22Q9ER62 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfrsf22Q9ER62 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfrsf22Q9ER62 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfrsf22Q9ER62 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Tnfrsf22Q9ER62 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Tnfrsf22Q9ER62 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfrsf22Q9ER62 AC153794.1-201ENSMUST00000169148 126 ntBASIC15.29■□□□□ 0.04
Tnfrsf22Q9ER62 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfrsf22Q9ER62 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfrsf22Q9ER62 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Tnfrsf22Q9ER62 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfrsf22Q9ER62 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfrsf22Q9ER62 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfrsf22Q9ER62 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfrsf22Q9ER62 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfrsf22Q9ER62 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfrsf22Q9ER62 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tnfrsf22Q9ER62 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tnfrsf22Q9ER62 Gm36858-201ENSMUST00000194501 2391 ntBASIC15.28■□□□□ 0.04
Tnfrsf22Q9ER62 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC15.28■□□□□ 0.04
Tnfrsf22Q9ER62 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tnfrsf22Q9ER62 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tnfrsf22Q9ER62 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tnfrsf22Q9ER62 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tnfrsf22Q9ER62 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tnfrsf22Q9ER62 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Tnfrsf22Q9ER62 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Tnfrsf22Q9ER62 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Tnfrsf22Q9ER62 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Tnfrsf22Q9ER62 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tnfrsf22Q9ER62 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tnfrsf22Q9ER62 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tnfrsf22Q9ER62 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC15.28■□□□□ 0.04
Tnfrsf22Q9ER62 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tnfrsf22Q9ER62 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tnfrsf22Q9ER62 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tnfrsf22Q9ER62 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tnfrsf22Q9ER62 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tnfrsf22Q9ER62 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tnfrsf22Q9ER62 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tnfrsf22Q9ER62 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tnfrsf22Q9ER62 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tnfrsf22Q9ER62 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tnfrsf22Q9ER62 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tnfrsf22Q9ER62 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tnfrsf22Q9ER62 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tnfrsf22Q9ER62 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tnfrsf22Q9ER62 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tnfrsf22Q9ER62 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tnfrsf22Q9ER62 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC15.27■□□□□ 0.04
Tnfrsf22Q9ER62 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC15.27■□□□□ 0.04
Tnfrsf22Q9ER62 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC15.27■□□□□ 0.04
Tnfrsf22Q9ER62 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Tnfrsf22Q9ER62 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC15.27■□□□□ 0.04
Tnfrsf22Q9ER62 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC15.27■□□□□ 0.04
Tnfrsf22Q9ER62 AC153889.1-201ENSMUST00000219257 330 ntBASIC15.27■□□□□ 0.04
Tnfrsf22Q9ER62 Cmtm5-203ENSMUST00000227441 610 ntBASIC15.27■□□□□ 0.04
Tnfrsf22Q9ER62 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Tnfrsf22Q9ER62 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tnfrsf22Q9ER62 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Tnfrsf22Q9ER62 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Tnfrsf22Q9ER62 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tnfrsf22Q9ER62 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tnfrsf22Q9ER62 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tnfrsf22Q9ER62 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Tnfrsf22Q9ER62 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Tnfrsf22Q9ER62 Gm16401-202ENSMUST00000197463 2074 ntBASIC15.26■□□□□ 0.03
Tnfrsf22Q9ER62 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tnfrsf22Q9ER62 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Tnfrsf22Q9ER62 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tnfrsf22Q9ER62 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Tnfrsf22Q9ER62 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tnfrsf22Q9ER62 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms