Protein–RNA interactions for Protein: Q9EQH3

Vps35, Vacuolar protein sorting-associated protein 35, mousemouse

Known RBP Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35Q9EQH3 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
Vps35Q9EQH3 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vps35Q9EQH3 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Vps35Q9EQH3 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vps35Q9EQH3 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Vps35Q9EQH3 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vps35Q9EQH3 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vps35Q9EQH3 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vps35Q9EQH3 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vps35Q9EQH3 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC16.4■□□□□ 0.22
Vps35Q9EQH3 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vps35Q9EQH3 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Vps35Q9EQH3 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Vps35Q9EQH3 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Vps35Q9EQH3 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vps35Q9EQH3 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Vps35Q9EQH3 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Vps35Q9EQH3 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vps35Q9EQH3 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vps35Q9EQH3 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Vps35Q9EQH3 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vps35Q9EQH3 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vps35Q9EQH3 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vps35Q9EQH3 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Vps35Q9EQH3 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vps35Q9EQH3 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vps35Q9EQH3 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vps35Q9EQH3 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vps35Q9EQH3 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vps35Q9EQH3 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Vps35Q9EQH3 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Vps35Q9EQH3 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vps35Q9EQH3 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Vps35Q9EQH3 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vps35Q9EQH3 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vps35Q9EQH3 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Vps35Q9EQH3 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vps35Q9EQH3 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC16.39■□□□□ 0.21
Vps35Q9EQH3 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vps35Q9EQH3 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vps35Q9EQH3 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Vps35Q9EQH3 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Vps35Q9EQH3 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Vps35Q9EQH3 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Vps35Q9EQH3 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC16.39■□□□□ 0.21
Vps35Q9EQH3 Gm11860-201ENSMUST00000122346 1010 ntBASIC16.39■□□□□ 0.21
Vps35Q9EQH3 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC16.39■□□□□ 0.21
Vps35Q9EQH3 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Vps35Q9EQH3 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vps35Q9EQH3 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vps35Q9EQH3 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vps35Q9EQH3 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vps35Q9EQH3 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vps35Q9EQH3 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vps35Q9EQH3 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Vps35Q9EQH3 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vps35Q9EQH3 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Vps35Q9EQH3 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Vps35Q9EQH3 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vps35Q9EQH3 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vps35Q9EQH3 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vps35Q9EQH3 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vps35Q9EQH3 Gm45203-201ENSMUST00000206384 1831 ntBASIC16.38■□□□□ 0.21
Vps35Q9EQH3 Gm8258-201ENSMUST00000055593 1449 ntBASIC16.38■□□□□ 0.21
Vps35Q9EQH3 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC16.38■□□□□ 0.21
Vps35Q9EQH3 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
Vps35Q9EQH3 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vps35Q9EQH3 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vps35Q9EQH3 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vps35Q9EQH3 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vps35Q9EQH3 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vps35Q9EQH3 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vps35Q9EQH3 Zfp264-201ENSMUST00000208656 1563 ntBASIC16.38■□□□□ 0.21
Vps35Q9EQH3 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vps35Q9EQH3 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vps35Q9EQH3 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vps35Q9EQH3 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Vps35Q9EQH3 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Vps35Q9EQH3 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vps35Q9EQH3 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vps35Q9EQH3 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vps35Q9EQH3 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vps35Q9EQH3 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Vps35Q9EQH3 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vps35Q9EQH3 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vps35Q9EQH3 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Vps35Q9EQH3 Gm6345-202ENSMUST00000180900 204 ntBASIC16.37■□□□□ 0.21
Vps35Q9EQH3 Gm29707-201ENSMUST00000196325 491 ntBASIC16.37■□□□□ 0.21
Vps35Q9EQH3 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC16.37■□□□□ 0.21
Vps35Q9EQH3 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vps35Q9EQH3 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vps35Q9EQH3 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vps35Q9EQH3 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vps35Q9EQH3 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vps35Q9EQH3 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Vps35Q9EQH3 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vps35Q9EQH3 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vps35Q9EQH3 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vps35Q9EQH3 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vps35Q9EQH3 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms