Protein–RNA interactions for Protein: Q9D9Y8

Ssmem1, RIKEN cDNA 1700025E21, isoform CRA_b, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssmem1Q9D9Y8 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ssmem1Q9D9Y8 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ssmem1Q9D9Y8 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ssmem1Q9D9Y8 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ssmem1Q9D9Y8 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ssmem1Q9D9Y8 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Ssmem1Q9D9Y8 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ssmem1Q9D9Y8 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ssmem1Q9D9Y8 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC14.14□□□□□ -0.15
Ssmem1Q9D9Y8 Gm44430-201ENSMUST00000203376 995 ntBASIC14.14□□□□□ -0.15
Ssmem1Q9D9Y8 Otx2os1-206ENSMUST00000228153 787 ntBASIC14.14□□□□□ -0.15
Ssmem1Q9D9Y8 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ssmem1Q9D9Y8 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ssmem1Q9D9Y8 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ssmem1Q9D9Y8 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ssmem1Q9D9Y8 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ssmem1Q9D9Y8 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Ssmem1Q9D9Y8 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ssmem1Q9D9Y8 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ssmem1Q9D9Y8 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ssmem1Q9D9Y8 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ssmem1Q9D9Y8 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ssmem1Q9D9Y8 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ssmem1Q9D9Y8 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Ssmem1Q9D9Y8 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ssmem1Q9D9Y8 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ssmem1Q9D9Y8 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ssmem1Q9D9Y8 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Ssmem1Q9D9Y8 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ssmem1Q9D9Y8 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ssmem1Q9D9Y8 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC14.13□□□□□ -0.15
Ssmem1Q9D9Y8 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ssmem1Q9D9Y8 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ssmem1Q9D9Y8 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ssmem1Q9D9Y8 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
Ssmem1Q9D9Y8 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC14.13□□□□□ -0.15
Ssmem1Q9D9Y8 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Ssmem1Q9D9Y8 Gm27357-201ENSMUST00000183754 135 ntBASIC14.13□□□□□ -0.15
Ssmem1Q9D9Y8 Ank2-226ENSMUST00000189368 339 ntBASIC14.13□□□□□ -0.15
Ssmem1Q9D9Y8 Gm10459-201ENSMUST00000202708 1155 ntBASIC14.13□□□□□ -0.15
Ssmem1Q9D9Y8 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
Ssmem1Q9D9Y8 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ssmem1Q9D9Y8 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ssmem1Q9D9Y8 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ssmem1Q9D9Y8 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC14.13□□□□□ -0.15
Ssmem1Q9D9Y8 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ssmem1Q9D9Y8 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ssmem1Q9D9Y8 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ssmem1Q9D9Y8 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ssmem1Q9D9Y8 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Ssmem1Q9D9Y8 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ssmem1Q9D9Y8 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ssmem1Q9D9Y8 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ssmem1Q9D9Y8 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ssmem1Q9D9Y8 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC14.13□□□□□ -0.15
Ssmem1Q9D9Y8 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ssmem1Q9D9Y8 Gm8839-201ENSMUST00000121279 1645 ntBASIC14.12□□□□□ -0.15
Ssmem1Q9D9Y8 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ssmem1Q9D9Y8 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ssmem1Q9D9Y8 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Ssmem1Q9D9Y8 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ssmem1Q9D9Y8 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ssmem1Q9D9Y8 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ssmem1Q9D9Y8 Gm17807-201ENSMUST00000186869 298 ntBASIC14.12□□□□□ -0.15
Ssmem1Q9D9Y8 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC14.12□□□□□ -0.15
Ssmem1Q9D9Y8 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Ssmem1Q9D9Y8 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ssmem1Q9D9Y8 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ssmem1Q9D9Y8 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ssmem1Q9D9Y8 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ssmem1Q9D9Y8 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ssmem1Q9D9Y8 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ssmem1Q9D9Y8 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ssmem1Q9D9Y8 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ssmem1Q9D9Y8 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ssmem1Q9D9Y8 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ssmem1Q9D9Y8 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ssmem1Q9D9Y8 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ssmem1Q9D9Y8 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ssmem1Q9D9Y8 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ssmem1Q9D9Y8 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ssmem1Q9D9Y8 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ssmem1Q9D9Y8 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC14.11□□□□□ -0.15
Ssmem1Q9D9Y8 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ssmem1Q9D9Y8 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ssmem1Q9D9Y8 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ssmem1Q9D9Y8 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Ssmem1Q9D9Y8 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ssmem1Q9D9Y8 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ssmem1Q9D9Y8 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ssmem1Q9D9Y8 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Ssmem1Q9D9Y8 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ssmem1Q9D9Y8 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ssmem1Q9D9Y8 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ssmem1Q9D9Y8 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ssmem1Q9D9Y8 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Ssmem1Q9D9Y8 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ssmem1Q9D9Y8 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ssmem1Q9D9Y8 Gm36858-201ENSMUST00000194501 2391 ntBASIC14.11□□□□□ -0.15
Ssmem1Q9D9Y8 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms