Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Chmp4cQ9D7F7 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Chmp4cQ9D7F7 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Chmp4cQ9D7F7 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC19.61■□□□□ 0.73
Chmp4cQ9D7F7 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Chmp4cQ9D7F7 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Chmp4cQ9D7F7 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Chmp4cQ9D7F7 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Chmp4cQ9D7F7 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Chmp4cQ9D7F7 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC19.61■□□□□ 0.73
Chmp4cQ9D7F7 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Chmp4cQ9D7F7 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Chmp4cQ9D7F7 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC19.61■□□□□ 0.73
Chmp4cQ9D7F7 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Chmp4cQ9D7F7 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Chmp4cQ9D7F7 AC154855.1-201ENSMUST00000227353 1458 ntBASIC19.6■□□□□ 0.73
Chmp4cQ9D7F7 Gfra2-202ENSMUST00000227633 1480 ntBASIC19.6■□□□□ 0.73
Chmp4cQ9D7F7 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Chmp4cQ9D7F7 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Chmp4cQ9D7F7 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Chmp4cQ9D7F7 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Chmp4cQ9D7F7 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Chmp4cQ9D7F7 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Chmp4cQ9D7F7 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Chmp4cQ9D7F7 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Chmp4cQ9D7F7 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Chmp4cQ9D7F7 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Chmp4cQ9D7F7 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Chmp4cQ9D7F7 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Chmp4cQ9D7F7 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC19.59■□□□□ 0.73
Chmp4cQ9D7F7 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Chmp4cQ9D7F7 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Chmp4cQ9D7F7 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC19.59■□□□□ 0.73
Chmp4cQ9D7F7 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC19.59■□□□□ 0.73
Chmp4cQ9D7F7 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Chmp4cQ9D7F7 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Chmp4cQ9D7F7 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Chmp4cQ9D7F7 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Chmp4cQ9D7F7 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Chmp4cQ9D7F7 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC19.59■□□□□ 0.73
Chmp4cQ9D7F7 AC107711.5-202ENSMUST00000226429 702 ntBASIC19.59■□□□□ 0.73
Chmp4cQ9D7F7 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Chmp4cQ9D7F7 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Chmp4cQ9D7F7 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Chmp4cQ9D7F7 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Chmp4cQ9D7F7 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Chmp4cQ9D7F7 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Chmp4cQ9D7F7 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Chmp4cQ9D7F7 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Chmp4cQ9D7F7 Phf7-203ENSMUST00000226565 1971 ntBASIC19.59■□□□□ 0.73
Chmp4cQ9D7F7 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Chmp4cQ9D7F7 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Chmp4cQ9D7F7 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Chmp4cQ9D7F7 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Chmp4cQ9D7F7 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Chmp4cQ9D7F7 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Chmp4cQ9D7F7 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Chmp4cQ9D7F7 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC19.58■□□□□ 0.73
Chmp4cQ9D7F7 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Chmp4cQ9D7F7 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC19.58■□□□□ 0.73
Chmp4cQ9D7F7 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Chmp4cQ9D7F7 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Chmp4cQ9D7F7 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC19.58■□□□□ 0.73
Chmp4cQ9D7F7 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Chmp4cQ9D7F7 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.73
Chmp4cQ9D7F7 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Chmp4cQ9D7F7 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Chmp4cQ9D7F7 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Chmp4cQ9D7F7 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Chmp4cQ9D7F7 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Chmp4cQ9D7F7 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Chmp4cQ9D7F7 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Chmp4cQ9D7F7 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Chmp4cQ9D7F7 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Chmp4cQ9D7F7 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC19.58■□□□□ 0.72
Chmp4cQ9D7F7 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Chmp4cQ9D7F7 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Chmp4cQ9D7F7 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Chmp4cQ9D7F7 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Chmp4cQ9D7F7 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Chmp4cQ9D7F7 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Chmp4cQ9D7F7 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Chmp4cQ9D7F7 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC19.57■□□□□ 0.72
Chmp4cQ9D7F7 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC19.57■□□□□ 0.72
Chmp4cQ9D7F7 Gm37055-201ENSMUST00000191866 133 ntBASIC19.57■□□□□ 0.72
Chmp4cQ9D7F7 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Chmp4cQ9D7F7 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Chmp4cQ9D7F7 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Chmp4cQ9D7F7 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Chmp4cQ9D7F7 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Chmp4cQ9D7F7 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Chmp4cQ9D7F7 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Chmp4cQ9D7F7 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC19.57■□□□□ 0.72
Chmp4cQ9D7F7 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Chmp4cQ9D7F7 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Chmp4cQ9D7F7 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Chmp4cQ9D7F7 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC19.56■□□□□ 0.72
Chmp4cQ9D7F7 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Chmp4cQ9D7F7 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Chmp4cQ9D7F7 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms