Protein–RNA interactions for Protein: Q9CXK8

Nip7, 60S ribosome subunit biogenesis protein NIP7 homolog, mousemouse

Known RBP Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nip7Q9CXK8 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Nip7Q9CXK8 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Nip7Q9CXK8 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nip7Q9CXK8 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC20.35■□□□□ 0.85
Nip7Q9CXK8 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Nip7Q9CXK8 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nip7Q9CXK8 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nip7Q9CXK8 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nip7Q9CXK8 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Nip7Q9CXK8 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nip7Q9CXK8 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Nip7Q9CXK8 Gm5837-201ENSMUST00000191844 1369 ntBASIC20.34■□□□□ 0.85
Nip7Q9CXK8 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC20.34■□□□□ 0.85
Nip7Q9CXK8 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nip7Q9CXK8 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nip7Q9CXK8 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nip7Q9CXK8 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Nip7Q9CXK8 Gm13036-201ENSMUST00000117799 748 ntBASIC20.34■□□□□ 0.85
Nip7Q9CXK8 Gm14140-201ENSMUST00000119999 995 ntBASIC20.34■□□□□ 0.85
Nip7Q9CXK8 Gm27702-201ENSMUST00000184512 56 ntBASIC20.34■□□□□ 0.85
Nip7Q9CXK8 Gm27628-201ENSMUST00000184911 107 ntBASIC20.34■□□□□ 0.85
Nip7Q9CXK8 Gm43935-201ENSMUST00000203569 1050 ntBASIC20.34■□□□□ 0.85
Nip7Q9CXK8 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nip7Q9CXK8 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Nip7Q9CXK8 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC20.34■□□□□ 0.85
Nip7Q9CXK8 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nip7Q9CXK8 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Nip7Q9CXK8 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Nip7Q9CXK8 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nip7Q9CXK8 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nip7Q9CXK8 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Nip7Q9CXK8 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nip7Q9CXK8 Gm43182-201ENSMUST00000199476 2528 ntBASIC20.33■□□□□ 0.85
Nip7Q9CXK8 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Nip7Q9CXK8 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Nip7Q9CXK8 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Nip7Q9CXK8 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Nip7Q9CXK8 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Nip7Q9CXK8 CT943659.1-201ENSMUST00000215459 326 ntBASIC20.33■□□□□ 0.85
Nip7Q9CXK8 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Nip7Q9CXK8 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Nip7Q9CXK8 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Nip7Q9CXK8 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC20.33■□□□□ 0.84
Nip7Q9CXK8 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Nip7Q9CXK8 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Nip7Q9CXK8 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Nip7Q9CXK8 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
Nip7Q9CXK8 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Nip7Q9CXK8 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nip7Q9CXK8 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Nip7Q9CXK8 Gm6184-201ENSMUST00000120403 1261 ntBASIC20.32■□□□□ 0.84
Nip7Q9CXK8 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nip7Q9CXK8 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Nip7Q9CXK8 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nip7Q9CXK8 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nip7Q9CXK8 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nip7Q9CXK8 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nip7Q9CXK8 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nip7Q9CXK8 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nip7Q9CXK8 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC20.31■□□□□ 0.84
Nip7Q9CXK8 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Nip7Q9CXK8 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nip7Q9CXK8 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC20.31■□□□□ 0.84
Nip7Q9CXK8 Gm14494-201ENSMUST00000118786 435 ntBASIC20.31■□□□□ 0.84
Nip7Q9CXK8 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Nip7Q9CXK8 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Nip7Q9CXK8 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Nip7Q9CXK8 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nip7Q9CXK8 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Nip7Q9CXK8 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Nip7Q9CXK8 Gm3928-201ENSMUST00000121141 1307 ntBASIC20.3■□□□□ 0.84
Nip7Q9CXK8 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nip7Q9CXK8 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC20.3■□□□□ 0.84
Nip7Q9CXK8 Ddx41-204ENSMUST00000224765 2199 ntBASIC20.3■□□□□ 0.84
Nip7Q9CXK8 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Nip7Q9CXK8 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Nip7Q9CXK8 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Nip7Q9CXK8 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC20.3■□□□□ 0.84
Nip7Q9CXK8 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nip7Q9CXK8 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC20.3■□□□□ 0.84
Nip7Q9CXK8 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nip7Q9CXK8 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
Nip7Q9CXK8 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nip7Q9CXK8 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nip7Q9CXK8 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nip7Q9CXK8 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nip7Q9CXK8 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nip7Q9CXK8 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nip7Q9CXK8 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nip7Q9CXK8 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nip7Q9CXK8 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nip7Q9CXK8 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nip7Q9CXK8 Gm7222-201ENSMUST00000117512 906 ntBASIC20.29■□□□□ 0.84
Nip7Q9CXK8 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Nip7Q9CXK8 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Nip7Q9CXK8 Gm43575-201ENSMUST00000196420 516 ntBASIC20.29■□□□□ 0.84
Nip7Q9CXK8 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nip7Q9CXK8 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nip7Q9CXK8 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nip7Q9CXK8 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms