Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Smc3Q9CW03 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC19.26■□□□□ 0.67
Smc3Q9CW03 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC19.26■□□□□ 0.67
Smc3Q9CW03 AC135963.1-201ENSMUST00000211640 717 ntBASIC19.26■□□□□ 0.67
Smc3Q9CW03 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smc3Q9CW03 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smc3Q9CW03 Gm10812-201ENSMUST00000099864 546 ntBASIC19.26■□□□□ 0.67
Smc3Q9CW03 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC19.26■□□□□ 0.67
Smc3Q9CW03 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smc3Q9CW03 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smc3Q9CW03 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smc3Q9CW03 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
Smc3Q9CW03 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC19.26■□□□□ 0.67
Smc3Q9CW03 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Smc3Q9CW03 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smc3Q9CW03 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Smc3Q9CW03 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smc3Q9CW03 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smc3Q9CW03 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Smc3Q9CW03 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smc3Q9CW03 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smc3Q9CW03 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smc3Q9CW03 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smc3Q9CW03 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smc3Q9CW03 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smc3Q9CW03 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smc3Q9CW03 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Smc3Q9CW03 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smc3Q9CW03 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Smc3Q9CW03 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Smc3Q9CW03 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC19.25■□□□□ 0.67
Smc3Q9CW03 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smc3Q9CW03 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Smc3Q9CW03 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC19.25■□□□□ 0.67
Smc3Q9CW03 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Smc3Q9CW03 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smc3Q9CW03 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smc3Q9CW03 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC19.25■□□□□ 0.67
Smc3Q9CW03 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smc3Q9CW03 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Smc3Q9CW03 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smc3Q9CW03 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC19.24■□□□□ 0.67
Smc3Q9CW03 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smc3Q9CW03 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
Smc3Q9CW03 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Smc3Q9CW03 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Smc3Q9CW03 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Smc3Q9CW03 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC19.24■□□□□ 0.67
Smc3Q9CW03 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC19.24■□□□□ 0.67
Smc3Q9CW03 Gm22240-201ENSMUST00000175225 82 ntBASIC19.24■□□□□ 0.67
Smc3Q9CW03 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC19.24■□□□□ 0.67
Smc3Q9CW03 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Smc3Q9CW03 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smc3Q9CW03 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smc3Q9CW03 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smc3Q9CW03 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smc3Q9CW03 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Smc3Q9CW03 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Smc3Q9CW03 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Smc3Q9CW03 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC19.23■□□□□ 0.67
Smc3Q9CW03 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Smc3Q9CW03 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Smc3Q9CW03 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smc3Q9CW03 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Smc3Q9CW03 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Smc3Q9CW03 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smc3Q9CW03 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC19.23■□□□□ 0.67
Smc3Q9CW03 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC19.23■□□□□ 0.67
Smc3Q9CW03 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smc3Q9CW03 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smc3Q9CW03 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Smc3Q9CW03 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smc3Q9CW03 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smc3Q9CW03 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Smc3Q9CW03 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smc3Q9CW03 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smc3Q9CW03 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smc3Q9CW03 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Smc3Q9CW03 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smc3Q9CW03 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smc3Q9CW03 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smc3Q9CW03 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smc3Q9CW03 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC19.22■□□□□ 0.67
Smc3Q9CW03 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smc3Q9CW03 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smc3Q9CW03 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smc3Q9CW03 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smc3Q9CW03 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smc3Q9CW03 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smc3Q9CW03 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smc3Q9CW03 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smc3Q9CW03 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC19.22■□□□□ 0.67
Smc3Q9CW03 Gm11539-201ENSMUST00000119837 557 ntBASIC19.22■□□□□ 0.67
Smc3Q9CW03 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC19.22■□□□□ 0.67
Smc3Q9CW03 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smc3Q9CW03 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Smc3Q9CW03 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC19.22■□□□□ 0.67
Smc3Q9CW03 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smc3Q9CW03 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Smc3Q9CW03 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms