Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rpa3Q9CQ71 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rpa3Q9CQ71 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rpa3Q9CQ71 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rpa3Q9CQ71 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rpa3Q9CQ71 Gm11860-201ENSMUST00000122346 1010 ntBASIC17.31■□□□□ 0.36
Rpa3Q9CQ71 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC17.31■□□□□ 0.36
Rpa3Q9CQ71 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC17.31■□□□□ 0.36
Rpa3Q9CQ71 Gm25016-201ENSMUST00000158399 131 ntBASIC17.31■□□□□ 0.36
Rpa3Q9CQ71 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC17.31■□□□□ 0.36
Rpa3Q9CQ71 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rpa3Q9CQ71 Gm5587-201ENSMUST00000206270 674 ntBASIC17.31■□□□□ 0.36
Rpa3Q9CQ71 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rpa3Q9CQ71 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rpa3Q9CQ71 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rpa3Q9CQ71 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rpa3Q9CQ71 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rpa3Q9CQ71 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rpa3Q9CQ71 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rpa3Q9CQ71 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Rpa3Q9CQ71 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rpa3Q9CQ71 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rpa3Q9CQ71 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rpa3Q9CQ71 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rpa3Q9CQ71 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rpa3Q9CQ71 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Rpa3Q9CQ71 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rpa3Q9CQ71 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rpa3Q9CQ71 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Rpa3Q9CQ71 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC17.3■□□□□ 0.36
Rpa3Q9CQ71 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC17.3■□□□□ 0.36
Rpa3Q9CQ71 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC17.3■□□□□ 0.36
Rpa3Q9CQ71 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rpa3Q9CQ71 Gm37166-201ENSMUST00000195473 2474 ntBASIC17.3■□□□□ 0.36
Rpa3Q9CQ71 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Rpa3Q9CQ71 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rpa3Q9CQ71 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Rpa3Q9CQ71 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Rpa3Q9CQ71 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rpa3Q9CQ71 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rpa3Q9CQ71 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rpa3Q9CQ71 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Rpa3Q9CQ71 Gm26596-201ENSMUST00000180464 2655 ntBASIC17.29■□□□□ 0.36
Rpa3Q9CQ71 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rpa3Q9CQ71 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rpa3Q9CQ71 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rpa3Q9CQ71 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rpa3Q9CQ71 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rpa3Q9CQ71 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC17.29■□□□□ 0.36
Rpa3Q9CQ71 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rpa3Q9CQ71 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Rpa3Q9CQ71 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rpa3Q9CQ71 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rpa3Q9CQ71 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Rpa3Q9CQ71 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Rpa3Q9CQ71 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC17.29■□□□□ 0.36
Rpa3Q9CQ71 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rpa3Q9CQ71 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
Rpa3Q9CQ71 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC17.29■□□□□ 0.36
Rpa3Q9CQ71 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rpa3Q9CQ71 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rpa3Q9CQ71 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rpa3Q9CQ71 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rpa3Q9CQ71 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rpa3Q9CQ71 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rpa3Q9CQ71 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Rpa3Q9CQ71 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rpa3Q9CQ71 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rpa3Q9CQ71 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Rpa3Q9CQ71 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rpa3Q9CQ71 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rpa3Q9CQ71 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Rpa3Q9CQ71 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rpa3Q9CQ71 AA414768-201ENSMUST00000121924 1257 ntBASIC17.28■□□□□ 0.36
Rpa3Q9CQ71 Gm6728-201ENSMUST00000178117 1065 ntBASIC17.28■□□□□ 0.36
Rpa3Q9CQ71 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Rpa3Q9CQ71 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rpa3Q9CQ71 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rpa3Q9CQ71 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rpa3Q9CQ71 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rpa3Q9CQ71 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC17.28■□□□□ 0.36
Rpa3Q9CQ71 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rpa3Q9CQ71 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rpa3Q9CQ71 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rpa3Q9CQ71 Gm26917-202ENSMUST00000192833 3329 ntBASIC17.28■□□□□ 0.36
Rpa3Q9CQ71 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rpa3Q9CQ71 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rpa3Q9CQ71 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rpa3Q9CQ71 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rpa3Q9CQ71 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rpa3Q9CQ71 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rpa3Q9CQ71 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Rpa3Q9CQ71 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rpa3Q9CQ71 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rpa3Q9CQ71 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rpa3Q9CQ71 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Rpa3Q9CQ71 Mir770-201ENSMUST00000103252 94 ntBASIC17.27■□□□□ 0.36
Rpa3Q9CQ71 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rpa3Q9CQ71 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rpa3Q9CQ71 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms