Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim11Q99PQ2 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim11Q99PQ2 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim11Q99PQ2 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim11Q99PQ2 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim11Q99PQ2 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC18.65■□□□□ 0.58
Trim11Q99PQ2 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Trim11Q99PQ2 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim11Q99PQ2 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim11Q99PQ2 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim11Q99PQ2 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC18.65■□□□□ 0.58
Trim11Q99PQ2 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim11Q99PQ2 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Trim11Q99PQ2 Gm29707-201ENSMUST00000196325 491 ntBASIC18.65■□□□□ 0.58
Trim11Q99PQ2 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim11Q99PQ2 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim11Q99PQ2 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Trim11Q99PQ2 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Trim11Q99PQ2 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Trim11Q99PQ2 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Trim11Q99PQ2 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim11Q99PQ2 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim11Q99PQ2 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim11Q99PQ2 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim11Q99PQ2 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Trim11Q99PQ2 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Trim11Q99PQ2 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Trim11Q99PQ2 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Trim11Q99PQ2 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Trim11Q99PQ2 Gm42918-201ENSMUST00000199249 1580 ntBASIC18.64■□□□□ 0.58
Trim11Q99PQ2 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Trim11Q99PQ2 Gm43072-201ENSMUST00000200283 1671 ntBASIC18.64■□□□□ 0.57
Trim11Q99PQ2 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Trim11Q99PQ2 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim11Q99PQ2 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim11Q99PQ2 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim11Q99PQ2 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC18.64■□□□□ 0.57
Trim11Q99PQ2 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Trim11Q99PQ2 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC18.64■□□□□ 0.57
Trim11Q99PQ2 Gm26039-201ENSMUST00000158152 144 ntBASIC18.64■□□□□ 0.57
Trim11Q99PQ2 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim11Q99PQ2 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC18.64■□□□□ 0.57
Trim11Q99PQ2 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim11Q99PQ2 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Trim11Q99PQ2 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim11Q99PQ2 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Trim11Q99PQ2 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim11Q99PQ2 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim11Q99PQ2 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Trim11Q99PQ2 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim11Q99PQ2 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Trim11Q99PQ2 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim11Q99PQ2 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim11Q99PQ2 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim11Q99PQ2 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trim11Q99PQ2 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC18.63■□□□□ 0.57
Trim11Q99PQ2 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC18.63■□□□□ 0.57
Trim11Q99PQ2 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim11Q99PQ2 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Trim11Q99PQ2 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC18.63■□□□□ 0.57
Trim11Q99PQ2 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC18.63■□□□□ 0.57
Trim11Q99PQ2 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trim11Q99PQ2 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim11Q99PQ2 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim11Q99PQ2 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim11Q99PQ2 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trim11Q99PQ2 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim11Q99PQ2 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trim11Q99PQ2 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim11Q99PQ2 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim11Q99PQ2 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Trim11Q99PQ2 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim11Q99PQ2 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim11Q99PQ2 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Trim11Q99PQ2 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim11Q99PQ2 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC18.62■□□□□ 0.57
Trim11Q99PQ2 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim11Q99PQ2 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim11Q99PQ2 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC18.62■□□□□ 0.57
Trim11Q99PQ2 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Trim11Q99PQ2 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim11Q99PQ2 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Trim11Q99PQ2 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Trim11Q99PQ2 Slc35b2-202ENSMUST00000223987 1766 ntBASIC18.62■□□□□ 0.57
Trim11Q99PQ2 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim11Q99PQ2 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim11Q99PQ2 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim11Q99PQ2 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim11Q99PQ2 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim11Q99PQ2 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim11Q99PQ2 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC18.61■□□□□ 0.57
Trim11Q99PQ2 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Trim11Q99PQ2 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim11Q99PQ2 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim11Q99PQ2 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim11Q99PQ2 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim11Q99PQ2 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim11Q99PQ2 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim11Q99PQ2 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Trim11Q99PQ2 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms