Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cdh23Q99PF4 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cdh23Q99PF4 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cdh23Q99PF4 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cdh23Q99PF4 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cdh23Q99PF4 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Cdh23Q99PF4 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Cdh23Q99PF4 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cdh23Q99PF4 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cdh23Q99PF4 Mir1895-201ENSMUST00000122615 79 ntBASIC16.61■□□□□ 0.25
Cdh23Q99PF4 Gm2308-201ENSMUST00000166539 1004 ntBASIC16.61■□□□□ 0.25
Cdh23Q99PF4 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Cdh23Q99PF4 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cdh23Q99PF4 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Cdh23Q99PF4 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Cdh23Q99PF4 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Cdh23Q99PF4 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cdh23Q99PF4 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC16.61■□□□□ 0.25
Cdh23Q99PF4 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Cdh23Q99PF4 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Cdh23Q99PF4 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC16.61■□□□□ 0.25
Cdh23Q99PF4 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Cdh23Q99PF4 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cdh23Q99PF4 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Cdh23Q99PF4 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Cdh23Q99PF4 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cdh23Q99PF4 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cdh23Q99PF4 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cdh23Q99PF4 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cdh23Q99PF4 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Cdh23Q99PF4 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC16.61■□□□□ 0.25
Cdh23Q99PF4 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cdh23Q99PF4 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cdh23Q99PF4 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
Cdh23Q99PF4 Gm37519-201ENSMUST00000191687 2210 ntBASIC16.6■□□□□ 0.25
Cdh23Q99PF4 Gm5866-201ENSMUST00000177881 973 ntBASIC16.6■□□□□ 0.25
Cdh23Q99PF4 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cdh23Q99PF4 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cdh23Q99PF4 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Cdh23Q99PF4 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cdh23Q99PF4 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cdh23Q99PF4 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cdh23Q99PF4 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC16.6■□□□□ 0.25
Cdh23Q99PF4 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cdh23Q99PF4 Gm13223-201ENSMUST00000118609 747 ntBASIC16.6■□□□□ 0.25
Cdh23Q99PF4 Gm45612-201ENSMUST00000211320 160 ntBASIC16.6■□□□□ 0.25
Cdh23Q99PF4 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
Cdh23Q99PF4 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cdh23Q99PF4 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Cdh23Q99PF4 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cdh23Q99PF4 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cdh23Q99PF4 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cdh23Q99PF4 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC16.6■□□□□ 0.25
Cdh23Q99PF4 AC130829.1-201ENSMUST00000221548 494 ntBASIC16.6■□□□□ 0.25
Cdh23Q99PF4 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC16.6■□□□□ 0.25
Cdh23Q99PF4 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cdh23Q99PF4 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cdh23Q99PF4 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC16.6■□□□□ 0.25
Cdh23Q99PF4 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Cdh23Q99PF4 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC16.59■□□□□ 0.25
Cdh23Q99PF4 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
Cdh23Q99PF4 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cdh23Q99PF4 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Cdh23Q99PF4 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cdh23Q99PF4 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC16.59■□□□□ 0.25
Cdh23Q99PF4 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Cdh23Q99PF4 Gm45747-201ENSMUST00000212203 999 ntBASIC16.59■□□□□ 0.25
Cdh23Q99PF4 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC16.59■□□□□ 0.25
Cdh23Q99PF4 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cdh23Q99PF4 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cdh23Q99PF4 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Cdh23Q99PF4 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Cdh23Q99PF4 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cdh23Q99PF4 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC16.59■□□□□ 0.25
Cdh23Q99PF4 Gm15222-202ENSMUST00000228667 1726 ntBASIC16.59■□□□□ 0.25
Cdh23Q99PF4 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Cdh23Q99PF4 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC16.59■□□□□ 0.25
Cdh23Q99PF4 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Cdh23Q99PF4 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Cdh23Q99PF4 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cdh23Q99PF4 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cdh23Q99PF4 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC16.58■□□□□ 0.25
Cdh23Q99PF4 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Cdh23Q99PF4 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Cdh23Q99PF4 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Cdh23Q99PF4 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Cdh23Q99PF4 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Cdh23Q99PF4 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
Cdh23Q99PF4 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
Cdh23Q99PF4 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cdh23Q99PF4 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cdh23Q99PF4 Gm43474-201ENSMUST00000196415 774 ntBASIC16.58■□□□□ 0.24
Cdh23Q99PF4 Gm8655-201ENSMUST00000221159 852 ntBASIC16.58■□□□□ 0.24
Cdh23Q99PF4 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cdh23Q99PF4 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
Cdh23Q99PF4 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Cdh23Q99PF4 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cdh23Q99PF4 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cdh23Q99PF4 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Cdh23Q99PF4 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms