Protein–RNA interactions for Protein: Q99N13

Hdac9, Histone deacetylase 9, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac9Q99N13 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hdac9Q99N13 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC19.24■□□□□ 0.67
Hdac9Q99N13 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
Hdac9Q99N13 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC19.24■□□□□ 0.67
Hdac9Q99N13 Gm43935-201ENSMUST00000203569 1050 ntBASIC19.24■□□□□ 0.67
Hdac9Q99N13 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Hdac9Q99N13 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC19.24■□□□□ 0.67
Hdac9Q99N13 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hdac9Q99N13 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hdac9Q99N13 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hdac9Q99N13 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hdac9Q99N13 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
Hdac9Q99N13 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hdac9Q99N13 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC19.24■□□□□ 0.67
Hdac9Q99N13 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hdac9Q99N13 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Hdac9Q99N13 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Hdac9Q99N13 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hdac9Q99N13 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Hdac9Q99N13 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Hdac9Q99N13 Gm5837-201ENSMUST00000191844 1369 ntBASIC19.23■□□□□ 0.67
Hdac9Q99N13 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hdac9Q99N13 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hdac9Q99N13 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hdac9Q99N13 Gm14140-201ENSMUST00000119999 995 ntBASIC19.23■□□□□ 0.67
Hdac9Q99N13 Gm11780-201ENSMUST00000136880 516 ntBASIC19.23■□□□□ 0.67
Hdac9Q99N13 CT943659.1-201ENSMUST00000215459 326 ntBASIC19.23■□□□□ 0.67
Hdac9Q99N13 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC19.23■□□□□ 0.67
Hdac9Q99N13 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC19.23■□□□□ 0.67
Hdac9Q99N13 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hdac9Q99N13 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hdac9Q99N13 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Hdac9Q99N13 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hdac9Q99N13 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hdac9Q99N13 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hdac9Q99N13 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC19.22■□□□□ 0.67
Hdac9Q99N13 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Hdac9Q99N13 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Hdac9Q99N13 Gm8349-201ENSMUST00000182720 1003 ntBASIC19.22■□□□□ 0.67
Hdac9Q99N13 Gm2756-201ENSMUST00000195851 400 ntBASIC19.22■□□□□ 0.67
Hdac9Q99N13 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Hdac9Q99N13 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hdac9Q99N13 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Hdac9Q99N13 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hdac9Q99N13 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hdac9Q99N13 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hdac9Q99N13 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hdac9Q99N13 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hdac9Q99N13 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hdac9Q99N13 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hdac9Q99N13 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC19.22■□□□□ 0.67
Hdac9Q99N13 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hdac9Q99N13 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Hdac9Q99N13 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hdac9Q99N13 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hdac9Q99N13 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hdac9Q99N13 Gm7222-201ENSMUST00000117512 906 ntBASIC19.21■□□□□ 0.67
Hdac9Q99N13 Gm6184-201ENSMUST00000120403 1261 ntBASIC19.21■□□□□ 0.67
Hdac9Q99N13 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Hdac9Q99N13 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Hdac9Q99N13 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hdac9Q99N13 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hdac9Q99N13 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hdac9Q99N13 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hdac9Q99N13 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hdac9Q99N13 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hdac9Q99N13 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Hdac9Q99N13 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hdac9Q99N13 Dmtn-207ENSMUST00000228001 2437 ntBASIC19.21■□□□□ 0.67
Hdac9Q99N13 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Hdac9Q99N13 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hdac9Q99N13 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hdac9Q99N13 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Hdac9Q99N13 Gm13036-201ENSMUST00000117799 748 ntBASIC19.2■□□□□ 0.66
Hdac9Q99N13 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Hdac9Q99N13 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hdac9Q99N13 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hdac9Q99N13 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Hdac9Q99N13 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hdac9Q99N13 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hdac9Q99N13 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hdac9Q99N13 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hdac9Q99N13 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hdac9Q99N13 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Hdac9Q99N13 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Hdac9Q99N13 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC19.19■□□□□ 0.66
Hdac9Q99N13 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hdac9Q99N13 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hdac9Q99N13 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hdac9Q99N13 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hdac9Q99N13 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
Hdac9Q99N13 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Hdac9Q99N13 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hdac9Q99N13 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Hdac9Q99N13 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hdac9Q99N13 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC19.19■□□□□ 0.66
Hdac9Q99N13 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC19.19■□□□□ 0.66
Hdac9Q99N13 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Hdac9Q99N13 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC19.19■□□□□ 0.66
Hdac9Q99N13 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms