Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cdk5rap3Q99LM2 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Cdk5rap3Q99LM2 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC16.98■□□□□ 0.31
Cdk5rap3Q99LM2 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cdk5rap3Q99LM2 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cdk5rap3Q99LM2 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cdk5rap3Q99LM2 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Cdk5rap3Q99LM2 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cdk5rap3Q99LM2 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC16.97■□□□□ 0.31
Cdk5rap3Q99LM2 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC16.97■□□□□ 0.31
Cdk5rap3Q99LM2 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Cdk5rap3Q99LM2 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Cdk5rap3Q99LM2 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cdk5rap3Q99LM2 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Cdk5rap3Q99LM2 Phf7-203ENSMUST00000226565 1971 ntBASIC16.97■□□□□ 0.31
Cdk5rap3Q99LM2 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC16.97■□□□□ 0.31
Cdk5rap3Q99LM2 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC16.97■□□□□ 0.31
Cdk5rap3Q99LM2 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC16.97■□□□□ 0.31
Cdk5rap3Q99LM2 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Cdk5rap3Q99LM2 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cdk5rap3Q99LM2 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cdk5rap3Q99LM2 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Cdk5rap3Q99LM2 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Cdk5rap3Q99LM2 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Cdk5rap3Q99LM2 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cdk5rap3Q99LM2 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cdk5rap3Q99LM2 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cdk5rap3Q99LM2 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cdk5rap3Q99LM2 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cdk5rap3Q99LM2 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Cdk5rap3Q99LM2 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Cdk5rap3Q99LM2 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cdk5rap3Q99LM2 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Cdk5rap3Q99LM2 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Cdk5rap3Q99LM2 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC16.96■□□□□ 0.31
Cdk5rap3Q99LM2 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC16.96■□□□□ 0.31
Cdk5rap3Q99LM2 Gm4217-201ENSMUST00000182243 1002 ntBASIC16.96■□□□□ 0.31
Cdk5rap3Q99LM2 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC16.96■□□□□ 0.31
Cdk5rap3Q99LM2 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC16.96■□□□□ 0.31
Cdk5rap3Q99LM2 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Cdk5rap3Q99LM2 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cdk5rap3Q99LM2 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cdk5rap3Q99LM2 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cdk5rap3Q99LM2 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cdk5rap3Q99LM2 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cdk5rap3Q99LM2 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
Cdk5rap3Q99LM2 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Cdk5rap3Q99LM2 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
Cdk5rap3Q99LM2 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Cdk5rap3Q99LM2 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Cdk5rap3Q99LM2 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Cdk5rap3Q99LM2 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cdk5rap3Q99LM2 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cdk5rap3Q99LM2 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cdk5rap3Q99LM2 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cdk5rap3Q99LM2 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
Cdk5rap3Q99LM2 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Cdk5rap3Q99LM2 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cdk5rap3Q99LM2 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cdk5rap3Q99LM2 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cdk5rap3Q99LM2 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Cdk5rap3Q99LM2 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cdk5rap3Q99LM2 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cdk5rap3Q99LM2 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cdk5rap3Q99LM2 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
Cdk5rap3Q99LM2 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Cdk5rap3Q99LM2 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cdk5rap3Q99LM2 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cdk5rap3Q99LM2 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Cdk5rap3Q99LM2 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cdk5rap3Q99LM2 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
Cdk5rap3Q99LM2 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cdk5rap3Q99LM2 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cdk5rap3Q99LM2 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC16.94■□□□□ 0.3
Cdk5rap3Q99LM2 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cdk5rap3Q99LM2 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC16.94■□□□□ 0.3
Cdk5rap3Q99LM2 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cdk5rap3Q99LM2 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cdk5rap3Q99LM2 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Cdk5rap3Q99LM2 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Cdk5rap3Q99LM2 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cdk5rap3Q99LM2 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Cdk5rap3Q99LM2 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
Cdk5rap3Q99LM2 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Cdk5rap3Q99LM2 AC135963.1-201ENSMUST00000211640 717 ntBASIC16.94■□□□□ 0.3
Cdk5rap3Q99LM2 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Cdk5rap3Q99LM2 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Cdk5rap3Q99LM2 Gm18115-201ENSMUST00000221209 621 ntBASIC16.94■□□□□ 0.3
Cdk5rap3Q99LM2 Arhgef33-211ENSMUST00000225658 473 ntBASIC16.94■□□□□ 0.3
Cdk5rap3Q99LM2 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Cdk5rap3Q99LM2 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Cdk5rap3Q99LM2 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cdk5rap3Q99LM2 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Cdk5rap3Q99LM2 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC16.94■□□□□ 0.3
Cdk5rap3Q99LM2 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cdk5rap3Q99LM2 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Cdk5rap3Q99LM2 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cdk5rap3Q99LM2 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cdk5rap3Q99LM2 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cdk5rap3Q99LM2 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms