Protein–RNA interactions for Protein: Q921W0

Chmp1a, Charged multivesicular body protein 1a, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1aQ921W0 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Chmp1aQ921W0 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Chmp1aQ921W0 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Chmp1aQ921W0 Gm42545-201ENSMUST00000202755 922 ntBASIC14.5□□□□□ -0.09
Chmp1aQ921W0 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Chmp1aQ921W0 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Chmp1aQ921W0 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Chmp1aQ921W0 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Chmp1aQ921W0 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
Chmp1aQ921W0 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Chmp1aQ921W0 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Chmp1aQ921W0 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Chmp1aQ921W0 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Chmp1aQ921W0 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Chmp1aQ921W0 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Chmp1aQ921W0 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Chmp1aQ921W0 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Chmp1aQ921W0 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Chmp1aQ921W0 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Chmp1aQ921W0 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Chmp1aQ921W0 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Chmp1aQ921W0 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Chmp1aQ921W0 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Chmp1aQ921W0 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Chmp1aQ921W0 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Chmp1aQ921W0 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Chmp1aQ921W0 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Chmp1aQ921W0 Gm11249-201ENSMUST00000117071 859 ntBASIC14.49□□□□□ -0.09
Chmp1aQ921W0 Gm12896-201ENSMUST00000118430 226 ntBASIC14.49□□□□□ -0.09
Chmp1aQ921W0 Gm12382-201ENSMUST00000122005 922 ntBASIC14.49□□□□□ -0.09
Chmp1aQ921W0 Gm24841-201ENSMUST00000158676 357 ntBASIC14.49□□□□□ -0.09
Chmp1aQ921W0 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC14.49□□□□□ -0.09
Chmp1aQ921W0 Gm10517-202ENSMUST00000192970 758 ntBASIC14.49□□□□□ -0.09
Chmp1aQ921W0 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Chmp1aQ921W0 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Chmp1aQ921W0 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Chmp1aQ921W0 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Chmp1aQ921W0 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Chmp1aQ921W0 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC14.49□□□□□ -0.09
Chmp1aQ921W0 AC093043.3-201ENSMUST00000226531 2273 ntBASIC14.49□□□□□ -0.09
Chmp1aQ921W0 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Chmp1aQ921W0 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
Chmp1aQ921W0 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Chmp1aQ921W0 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Chmp1aQ921W0 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC14.49□□□□□ -0.09
Chmp1aQ921W0 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC14.49□□□□□ -0.09
Chmp1aQ921W0 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Chmp1aQ921W0 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Chmp1aQ921W0 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Chmp1aQ921W0 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Chmp1aQ921W0 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Chmp1aQ921W0 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Chmp1aQ921W0 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Chmp1aQ921W0 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Chmp1aQ921W0 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Chmp1aQ921W0 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Chmp1aQ921W0 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Chmp1aQ921W0 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC14.48□□□□□ -0.09
Chmp1aQ921W0 Gm13158-201ENSMUST00000122007 736 ntBASIC14.48□□□□□ -0.09
Chmp1aQ921W0 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC14.48□□□□□ -0.09
Chmp1aQ921W0 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Chmp1aQ921W0 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC14.48□□□□□ -0.09
Chmp1aQ921W0 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Chmp1aQ921W0 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Chmp1aQ921W0 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Chmp1aQ921W0 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Chmp1aQ921W0 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
Chmp1aQ921W0 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Chmp1aQ921W0 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Chmp1aQ921W0 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Chmp1aQ921W0 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Chmp1aQ921W0 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Chmp1aQ921W0 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Chmp1aQ921W0 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Chmp1aQ921W0 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Chmp1aQ921W0 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Chmp1aQ921W0 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Chmp1aQ921W0 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC14.47□□□□□ -0.09
Chmp1aQ921W0 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Chmp1aQ921W0 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Chmp1aQ921W0 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Chmp1aQ921W0 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC14.47□□□□□ -0.09
Chmp1aQ921W0 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Chmp1aQ921W0 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Chmp1aQ921W0 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Chmp1aQ921W0 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Chmp1aQ921W0 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Chmp1aQ921W0 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Chmp1aQ921W0 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Chmp1aQ921W0 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Chmp1aQ921W0 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC14.47□□□□□ -0.09
Chmp1aQ921W0 Gm18284-201ENSMUST00000172604 624 ntBASIC14.47□□□□□ -0.09
Chmp1aQ921W0 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Chmp1aQ921W0 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Chmp1aQ921W0 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Chmp1aQ921W0 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Chmp1aQ921W0 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
Chmp1aQ921W0 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
Chmp1aQ921W0 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Chmp1aQ921W0 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 75.6 ms