Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Gm15442-201ENSMUST00000117905 1527 ntBASIC17.04■□□□□ 0.32
Pcdhb1Q91Y08 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb1Q91Y08 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb1Q91Y08 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb1Q91Y08 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb1Q91Y08 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb1Q91Y08 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb1Q91Y08 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb1Q91Y08 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Pcdhb1Q91Y08 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb1Q91Y08 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Pcdhb1Q91Y08 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC17.03■□□□□ 0.32
Pcdhb1Q91Y08 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb1Q91Y08 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb1Q91Y08 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb1Q91Y08 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb1Q91Y08 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb1Q91Y08 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb1Q91Y08 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb1Q91Y08 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb1Q91Y08 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
Pcdhb1Q91Y08 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb1Q91Y08 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC17.03■□□□□ 0.32
Pcdhb1Q91Y08 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC17.03■□□□□ 0.32
Pcdhb1Q91Y08 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC17.03■□□□□ 0.32
Pcdhb1Q91Y08 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb1Q91Y08 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb1Q91Y08 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb1Q91Y08 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC17.03■□□□□ 0.32
Pcdhb1Q91Y08 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb1Q91Y08 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb1Q91Y08 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb1Q91Y08 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb1Q91Y08 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhb1Q91Y08 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhb1Q91Y08 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhb1Q91Y08 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhb1Q91Y08 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Pcdhb1Q91Y08 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhb1Q91Y08 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhb1Q91Y08 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Pcdhb1Q91Y08 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC17.02■□□□□ 0.32
Pcdhb1Q91Y08 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC17.02■□□□□ 0.32
Pcdhb1Q91Y08 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhb1Q91Y08 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC17.02■□□□□ 0.32
Pcdhb1Q91Y08 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Pcdhb1Q91Y08 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhb1Q91Y08 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pcdhb1Q91Y08 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Pcdhb1Q91Y08 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pcdhb1Q91Y08 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pcdhb1Q91Y08 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pcdhb1Q91Y08 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pcdhb1Q91Y08 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
Pcdhb1Q91Y08 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pcdhb1Q91Y08 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC17.01■□□□□ 0.31
Pcdhb1Q91Y08 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb1Q91Y08 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb1Q91Y08 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb1Q91Y08 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb1Q91Y08 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb1Q91Y08 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb1Q91Y08 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Pcdhb1Q91Y08 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb1Q91Y08 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb1Q91Y08 Gm14464-201ENSMUST00000119658 1254 ntBASIC17.01■□□□□ 0.31
Pcdhb1Q91Y08 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC17.01■□□□□ 0.31
Pcdhb1Q91Y08 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Pcdhb1Q91Y08 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC17.01■□□□□ 0.31
Pcdhb1Q91Y08 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb1Q91Y08 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb1Q91Y08 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb1Q91Y08 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb1Q91Y08 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb1Q91Y08 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb1Q91Y08 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb1Q91Y08 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb1Q91Y08 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb1Q91Y08 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb1Q91Y08 Gm43072-201ENSMUST00000200283 1671 ntBASIC17.01■□□□□ 0.31
Pcdhb1Q91Y08 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb1Q91Y08 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb1Q91Y08 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb1Q91Y08 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb1Q91Y08 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb1Q91Y08 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb1Q91Y08 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC17■□□□□ 0.31
Pcdhb1Q91Y08 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb1Q91Y08 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb1Q91Y08 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb1Q91Y08 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb1Q91Y08 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb1Q91Y08 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC17■□□□□ 0.31
Pcdhb1Q91Y08 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC17■□□□□ 0.31
Pcdhb1Q91Y08 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Pcdhb1Q91Y08 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC17■□□□□ 0.31
Pcdhb1Q91Y08 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
Pcdhb1Q91Y08 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb1Q91Y08 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb1Q91Y08 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 70.8 ms