Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC16.85■□□□□ 0.29
Pcdhb6Q91XZ4 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhb6Q91XZ4 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhb6Q91XZ4 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhb6Q91XZ4 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC16.85■□□□□ 0.29
Pcdhb6Q91XZ4 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
Pcdhb6Q91XZ4 Gm32996-201ENSMUST00000199828 1447 ntBASIC16.85■□□□□ 0.29
Pcdhb6Q91XZ4 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhb6Q91XZ4 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhb6Q91XZ4 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC16.85■□□□□ 0.29
Pcdhb6Q91XZ4 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhb6Q91XZ4 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhb6Q91XZ4 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhb6Q91XZ4 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb6Q91XZ4 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb6Q91XZ4 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb6Q91XZ4 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb6Q91XZ4 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Pcdhb6Q91XZ4 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.84■□□□□ 0.29
Pcdhb6Q91XZ4 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb6Q91XZ4 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb6Q91XZ4 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC16.84■□□□□ 0.29
Pcdhb6Q91XZ4 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC16.84■□□□□ 0.29
Pcdhb6Q91XZ4 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb6Q91XZ4 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC16.84■□□□□ 0.29
Pcdhb6Q91XZ4 AC121577.1-201ENSMUST00000227302 707 ntBASIC16.84■□□□□ 0.29
Pcdhb6Q91XZ4 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb6Q91XZ4 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Pcdhb6Q91XZ4 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb6Q91XZ4 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb6Q91XZ4 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb6Q91XZ4 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb6Q91XZ4 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb6Q91XZ4 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC16.84■□□□□ 0.29
Pcdhb6Q91XZ4 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb6Q91XZ4 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb6Q91XZ4 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb6Q91XZ4 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Pcdhb6Q91XZ4 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Pcdhb6Q91XZ4 Gm9013-201ENSMUST00000132939 882 ntBASIC16.83■□□□□ 0.28
Pcdhb6Q91XZ4 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhb6Q91XZ4 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Pcdhb6Q91XZ4 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhb6Q91XZ4 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhb6Q91XZ4 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhb6Q91XZ4 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Pcdhb6Q91XZ4 Gm43072-201ENSMUST00000200283 1671 ntBASIC16.83■□□□□ 0.28
Pcdhb6Q91XZ4 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhb6Q91XZ4 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhb6Q91XZ4 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhb6Q91XZ4 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC16.83■□□□□ 0.28
Pcdhb6Q91XZ4 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhb6Q91XZ4 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhb6Q91XZ4 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC16.82■□□□□ 0.28
Pcdhb6Q91XZ4 Zkscan4-202ENSMUST00000225845 1506 ntBASIC16.82■□□□□ 0.28
Pcdhb6Q91XZ4 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Pcdhb6Q91XZ4 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb6Q91XZ4 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Pcdhb6Q91XZ4 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC16.82■□□□□ 0.28
Pcdhb6Q91XZ4 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb6Q91XZ4 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC16.82■□□□□ 0.28
Pcdhb6Q91XZ4 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Pcdhb6Q91XZ4 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb6Q91XZ4 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb6Q91XZ4 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Pcdhb6Q91XZ4 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb6Q91XZ4 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb6Q91XZ4 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb6Q91XZ4 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb6Q91XZ4 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb6Q91XZ4 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb6Q91XZ4 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb6Q91XZ4 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Pcdhb6Q91XZ4 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb6Q91XZ4 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb6Q91XZ4 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC16.81■□□□□ 0.28
Pcdhb6Q91XZ4 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Pcdhb6Q91XZ4 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb6Q91XZ4 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Pcdhb6Q91XZ4 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb6Q91XZ4 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb6Q91XZ4 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb6Q91XZ4 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb6Q91XZ4 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb6Q91XZ4 Mir770-201ENSMUST00000103252 94 ntBASIC16.81■□□□□ 0.28
Pcdhb6Q91XZ4 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC16.81■□□□□ 0.28
Pcdhb6Q91XZ4 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb6Q91XZ4 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb6Q91XZ4 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb6Q91XZ4 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb6Q91XZ4 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb6Q91XZ4 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb6Q91XZ4 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb6Q91XZ4 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb6Q91XZ4 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb6Q91XZ4 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb6Q91XZ4 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb6Q91XZ4 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb6Q91XZ4 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC16.81■□□□□ 0.28
Pcdhb6Q91XZ4 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms