Protein–RNA interactions for Protein: Q8VEG0

Ccdc71, Coiled-coil domain-containing protein 71, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc71Q8VEG0 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc71Q8VEG0 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC16.92■□□□□ 0.3
Ccdc71Q8VEG0 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC16.92■□□□□ 0.3
Ccdc71Q8VEG0 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc71Q8VEG0 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc71Q8VEG0 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Ccdc71Q8VEG0 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc71Q8VEG0 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc71Q8VEG0 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc71Q8VEG0 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc71Q8VEG0 AC132265.1-201ENSMUST00000219233 1665 ntBASIC16.91■□□□□ 0.3
Ccdc71Q8VEG0 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc71Q8VEG0 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Ccdc71Q8VEG0 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
Ccdc71Q8VEG0 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc71Q8VEG0 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc71Q8VEG0 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc71Q8VEG0 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC16.91■□□□□ 0.3
Ccdc71Q8VEG0 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Ccdc71Q8VEG0 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC16.91■□□□□ 0.3
Ccdc71Q8VEG0 Mir6404-201ENSMUST00000183699 94 ntBASIC16.91■□□□□ 0.3
Ccdc71Q8VEG0 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc71Q8VEG0 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC16.91■□□□□ 0.3
Ccdc71Q8VEG0 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc71Q8VEG0 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC16.91■□□□□ 0.3
Ccdc71Q8VEG0 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC16.91■□□□□ 0.3
Ccdc71Q8VEG0 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc71Q8VEG0 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc71Q8VEG0 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc71Q8VEG0 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC16.91■□□□□ 0.3
Ccdc71Q8VEG0 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc71Q8VEG0 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc71Q8VEG0 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc71Q8VEG0 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc71Q8VEG0 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc71Q8VEG0 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc71Q8VEG0 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc71Q8VEG0 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC16.91■□□□□ 0.3
Ccdc71Q8VEG0 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc71Q8VEG0 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc71Q8VEG0 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc71Q8VEG0 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
Ccdc71Q8VEG0 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc71Q8VEG0 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc71Q8VEG0 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc71Q8VEG0 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc71Q8VEG0 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
Ccdc71Q8VEG0 Gm6736-201ENSMUST00000166583 948 ntBASIC16.9■□□□□ 0.3
Ccdc71Q8VEG0 AC084391.1-201ENSMUST00000200651 141 ntBASIC16.9■□□□□ 0.3
Ccdc71Q8VEG0 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc71Q8VEG0 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Ccdc71Q8VEG0 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc71Q8VEG0 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc71Q8VEG0 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc71Q8VEG0 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Ccdc71Q8VEG0 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC16.9■□□□□ 0.3
Ccdc71Q8VEG0 AC131586.3-201ENSMUST00000228355 1367 ntBASIC16.89■□□□□ 0.3
Ccdc71Q8VEG0 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Ccdc71Q8VEG0 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC16.89■□□□□ 0.3
Ccdc71Q8VEG0 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC16.89■□□□□ 0.3
Ccdc71Q8VEG0 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Ccdc71Q8VEG0 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ccdc71Q8VEG0 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ccdc71Q8VEG0 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ccdc71Q8VEG0 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ccdc71Q8VEG0 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ccdc71Q8VEG0 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC16.89■□□□□ 0.29
Ccdc71Q8VEG0 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ccdc71Q8VEG0 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ccdc71Q8VEG0 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ccdc71Q8VEG0 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC16.89■□□□□ 0.29
Ccdc71Q8VEG0 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC16.89■□□□□ 0.29
Ccdc71Q8VEG0 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC16.89■□□□□ 0.29
Ccdc71Q8VEG0 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC16.89■□□□□ 0.29
Ccdc71Q8VEG0 Gm2756-201ENSMUST00000195851 400 ntBASIC16.89■□□□□ 0.29
Ccdc71Q8VEG0 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC16.89■□□□□ 0.29
Ccdc71Q8VEG0 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ccdc71Q8VEG0 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ccdc71Q8VEG0 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Ccdc71Q8VEG0 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ccdc71Q8VEG0 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ccdc71Q8VEG0 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ccdc71Q8VEG0 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ccdc71Q8VEG0 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ccdc71Q8VEG0 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ccdc71Q8VEG0 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Ccdc71Q8VEG0 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ccdc71Q8VEG0 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ccdc71Q8VEG0 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
Ccdc71Q8VEG0 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ccdc71Q8VEG0 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC16.88■□□□□ 0.29
Ccdc71Q8VEG0 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ccdc71Q8VEG0 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ccdc71Q8VEG0 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ccdc71Q8VEG0 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ccdc71Q8VEG0 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC16.88■□□□□ 0.29
Ccdc71Q8VEG0 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Ccdc71Q8VEG0 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC16.88■□□□□ 0.29
Ccdc71Q8VEG0 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Ccdc71Q8VEG0 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms