Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vps39Q8R5L3 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vps39Q8R5L3 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vps39Q8R5L3 Spsb2-203ENSMUST00000112473 1322 ntBASIC16.42■□□□□ 0.22
Vps39Q8R5L3 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Vps39Q8R5L3 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Vps39Q8R5L3 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Vps39Q8R5L3 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vps39Q8R5L3 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Vps39Q8R5L3 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vps39Q8R5L3 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
Vps39Q8R5L3 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vps39Q8R5L3 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Vps39Q8R5L3 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vps39Q8R5L3 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vps39Q8R5L3 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC16.41■□□□□ 0.22
Vps39Q8R5L3 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vps39Q8R5L3 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Vps39Q8R5L3 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Vps39Q8R5L3 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Vps39Q8R5L3 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vps39Q8R5L3 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Vps39Q8R5L3 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC16.41■□□□□ 0.22
Vps39Q8R5L3 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC16.41■□□□□ 0.22
Vps39Q8R5L3 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vps39Q8R5L3 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Vps39Q8R5L3 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Vps39Q8R5L3 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vps39Q8R5L3 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC16.41■□□□□ 0.22
Vps39Q8R5L3 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vps39Q8R5L3 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC16.41■□□□□ 0.22
Vps39Q8R5L3 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vps39Q8R5L3 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Vps39Q8R5L3 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vps39Q8R5L3 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vps39Q8R5L3 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vps39Q8R5L3 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vps39Q8R5L3 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vps39Q8R5L3 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Vps39Q8R5L3 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Vps39Q8R5L3 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vps39Q8R5L3 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vps39Q8R5L3 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Vps39Q8R5L3 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vps39Q8R5L3 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Vps39Q8R5L3 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Vps39Q8R5L3 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vps39Q8R5L3 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vps39Q8R5L3 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vps39Q8R5L3 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Vps39Q8R5L3 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC16.39■□□□□ 0.21
Vps39Q8R5L3 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Vps39Q8R5L3 Zfp264-201ENSMUST00000208656 1563 ntBASIC16.39■□□□□ 0.21
Vps39Q8R5L3 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vps39Q8R5L3 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Vps39Q8R5L3 Ptprs-211ENSMUST00000223859 5588 ntBASIC16.39■□□□□ 0.21
Vps39Q8R5L3 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vps39Q8R5L3 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vps39Q8R5L3 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vps39Q8R5L3 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC16.39■□□□□ 0.21
Vps39Q8R5L3 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC16.39■□□□□ 0.21
Vps39Q8R5L3 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Vps39Q8R5L3 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC16.39■□□□□ 0.21
Vps39Q8R5L3 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Vps39Q8R5L3 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vps39Q8R5L3 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vps39Q8R5L3 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Vps39Q8R5L3 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vps39Q8R5L3 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Vps39Q8R5L3 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vps39Q8R5L3 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vps39Q8R5L3 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
Vps39Q8R5L3 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vps39Q8R5L3 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vps39Q8R5L3 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Vps39Q8R5L3 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vps39Q8R5L3 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vps39Q8R5L3 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vps39Q8R5L3 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Vps39Q8R5L3 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Vps39Q8R5L3 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Vps39Q8R5L3 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Vps39Q8R5L3 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vps39Q8R5L3 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vps39Q8R5L3 AC159205.6-201ENSMUST00000224935 887 ntBASIC16.38■□□□□ 0.21
Vps39Q8R5L3 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC16.38■□□□□ 0.21
Vps39Q8R5L3 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vps39Q8R5L3 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Vps39Q8R5L3 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vps39Q8R5L3 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vps39Q8R5L3 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Vps39Q8R5L3 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Vps39Q8R5L3 Gm42918-201ENSMUST00000199249 1580 ntBASIC16.38■□□□□ 0.21
Vps39Q8R5L3 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Vps39Q8R5L3 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC16.38■□□□□ 0.21
Vps39Q8R5L3 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Vps39Q8R5L3 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vps39Q8R5L3 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vps39Q8R5L3 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Vps39Q8R5L3 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms