Protein–RNA interactions for Protein: Q8R2T8

Gtf3c5, General transcription factor 3C polypeptide 5, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c5Q8R2T8 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gtf3c5Q8R2T8 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Gtf3c5Q8R2T8 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gtf3c5Q8R2T8 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gtf3c5Q8R2T8 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Gtf3c5Q8R2T8 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC19.21■□□□□ 0.67
Gtf3c5Q8R2T8 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gtf3c5Q8R2T8 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gtf3c5Q8R2T8 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gtf3c5Q8R2T8 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gtf3c5Q8R2T8 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC19.21■□□□□ 0.67
Gtf3c5Q8R2T8 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC19.21■□□□□ 0.67
Gtf3c5Q8R2T8 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gtf3c5Q8R2T8 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC19.21■□□□□ 0.67
Gtf3c5Q8R2T8 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gtf3c5Q8R2T8 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gtf3c5Q8R2T8 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gtf3c5Q8R2T8 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC19.21■□□□□ 0.67
Gtf3c5Q8R2T8 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC19.21■□□□□ 0.67
Gtf3c5Q8R2T8 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC19.21■□□□□ 0.67
Gtf3c5Q8R2T8 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
Gtf3c5Q8R2T8 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gtf3c5Q8R2T8 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gtf3c5Q8R2T8 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC19.21■□□□□ 0.67
Gtf3c5Q8R2T8 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gtf3c5Q8R2T8 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gtf3c5Q8R2T8 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gtf3c5Q8R2T8 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gtf3c5Q8R2T8 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gtf3c5Q8R2T8 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Gtf3c5Q8R2T8 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gtf3c5Q8R2T8 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gtf3c5Q8R2T8 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gtf3c5Q8R2T8 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
Gtf3c5Q8R2T8 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gtf3c5Q8R2T8 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gtf3c5Q8R2T8 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gtf3c5Q8R2T8 Gm11860-201ENSMUST00000122346 1010 ntBASIC19.2■□□□□ 0.66
Gtf3c5Q8R2T8 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC19.2■□□□□ 0.66
Gtf3c5Q8R2T8 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Gtf3c5Q8R2T8 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC19.2■□□□□ 0.66
Gtf3c5Q8R2T8 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Gtf3c5Q8R2T8 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gtf3c5Q8R2T8 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC19.2■□□□□ 0.66
Gtf3c5Q8R2T8 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gtf3c5Q8R2T8 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Gtf3c5Q8R2T8 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gtf3c5Q8R2T8 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gtf3c5Q8R2T8 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC19.2■□□□□ 0.66
Gtf3c5Q8R2T8 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gtf3c5Q8R2T8 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gtf3c5Q8R2T8 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gtf3c5Q8R2T8 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gtf3c5Q8R2T8 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gtf3c5Q8R2T8 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gtf3c5Q8R2T8 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gtf3c5Q8R2T8 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC19.19■□□□□ 0.66
Gtf3c5Q8R2T8 Ighv6-1-201ENSMUST00000193612 343 ntBASIC19.19■□□□□ 0.66
Gtf3c5Q8R2T8 Gm18421-201ENSMUST00000204122 625 ntBASIC19.19■□□□□ 0.66
Gtf3c5Q8R2T8 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Gtf3c5Q8R2T8 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gtf3c5Q8R2T8 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Gtf3c5Q8R2T8 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gtf3c5Q8R2T8 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gtf3c5Q8R2T8 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gtf3c5Q8R2T8 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gtf3c5Q8R2T8 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Gtf3c5Q8R2T8 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Gtf3c5Q8R2T8 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gtf3c5Q8R2T8 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Gtf3c5Q8R2T8 Gm8258-201ENSMUST00000055593 1449 ntBASIC19.18■□□□□ 0.66
Gtf3c5Q8R2T8 Ccdc166-201ENSMUST00000182172 2584 ntBASIC19.18■□□□□ 0.66
Gtf3c5Q8R2T8 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gtf3c5Q8R2T8 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gtf3c5Q8R2T8 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gtf3c5Q8R2T8 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gtf3c5Q8R2T8 Gm45328-201ENSMUST00000210942 917 ntBASIC19.18■□□□□ 0.66
Gtf3c5Q8R2T8 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Gtf3c5Q8R2T8 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Gtf3c5Q8R2T8 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gtf3c5Q8R2T8 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Gtf3c5Q8R2T8 Wnt10b-204ENSMUST00000226655 1807 ntBASIC19.18■□□□□ 0.66
Gtf3c5Q8R2T8 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gtf3c5Q8R2T8 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
Gtf3c5Q8R2T8 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gtf3c5Q8R2T8 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Gtf3c5Q8R2T8 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC19.17■□□□□ 0.66
Gtf3c5Q8R2T8 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Gtf3c5Q8R2T8 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC19.17■□□□□ 0.66
Gtf3c5Q8R2T8 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gtf3c5Q8R2T8 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gtf3c5Q8R2T8 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gtf3c5Q8R2T8 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gtf3c5Q8R2T8 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gtf3c5Q8R2T8 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gtf3c5Q8R2T8 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gtf3c5Q8R2T8 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gtf3c5Q8R2T8 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gtf3c5Q8R2T8 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Gtf3c5Q8R2T8 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms