Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Chmp7Q8R1T1 Gm8097-201ENSMUST00000117903 829 ntBASIC20.92■□□□□ 0.94
Chmp7Q8R1T1 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Chmp7Q8R1T1 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Chmp7Q8R1T1 Gm8349-201ENSMUST00000182720 1003 ntBASIC20.92■□□□□ 0.94
Chmp7Q8R1T1 Gm37584-201ENSMUST00000193595 1290 ntBASIC20.92■□□□□ 0.94
Chmp7Q8R1T1 Gm43073-201ENSMUST00000198200 1189 ntBASIC20.92■□□□□ 0.94
Chmp7Q8R1T1 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Chmp7Q8R1T1 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Chmp7Q8R1T1 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Chmp7Q8R1T1 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Chmp7Q8R1T1 AC154527.4-201ENSMUST00000224364 1667 ntBASIC20.92■□□□□ 0.94
Chmp7Q8R1T1 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Chmp7Q8R1T1 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Chmp7Q8R1T1 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Chmp7Q8R1T1 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Chmp7Q8R1T1 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Chmp7Q8R1T1 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Chmp7Q8R1T1 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Chmp7Q8R1T1 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Chmp7Q8R1T1 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Chmp7Q8R1T1 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC20.91■□□□□ 0.94
Chmp7Q8R1T1 Gm8000-201ENSMUST00000188378 592 ntBASIC20.91■□□□□ 0.94
Chmp7Q8R1T1 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC20.91■□□□□ 0.94
Chmp7Q8R1T1 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Chmp7Q8R1T1 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Chmp7Q8R1T1 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Chmp7Q8R1T1 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Chmp7Q8R1T1 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Chmp7Q8R1T1 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Chmp7Q8R1T1 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Chmp7Q8R1T1 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Chmp7Q8R1T1 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Chmp7Q8R1T1 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Chmp7Q8R1T1 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Chmp7Q8R1T1 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Chmp7Q8R1T1 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC20.9■□□□□ 0.94
Chmp7Q8R1T1 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Chmp7Q8R1T1 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Chmp7Q8R1T1 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Chmp7Q8R1T1 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Chmp7Q8R1T1 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Chmp7Q8R1T1 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Chmp7Q8R1T1 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Chmp7Q8R1T1 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC20.9■□□□□ 0.94
Chmp7Q8R1T1 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Chmp7Q8R1T1 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Chmp7Q8R1T1 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Chmp7Q8R1T1 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Chmp7Q8R1T1 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Chmp7Q8R1T1 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Chmp7Q8R1T1 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Chmp7Q8R1T1 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Chmp7Q8R1T1 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Chmp7Q8R1T1 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Chmp7Q8R1T1 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Chmp7Q8R1T1 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
Chmp7Q8R1T1 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Chmp7Q8R1T1 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Chmp7Q8R1T1 AC154757.1-201ENSMUST00000228289 336 ntBASIC20.89■□□□□ 0.93
Chmp7Q8R1T1 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Chmp7Q8R1T1 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Chmp7Q8R1T1 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Chmp7Q8R1T1 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Chmp7Q8R1T1 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.93
Chmp7Q8R1T1 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Chmp7Q8R1T1 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Chmp7Q8R1T1 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Chmp7Q8R1T1 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Chmp7Q8R1T1 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Chmp7Q8R1T1 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Chmp7Q8R1T1 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Chmp7Q8R1T1 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC20.88■□□□□ 0.93
Chmp7Q8R1T1 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Chmp7Q8R1T1 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC20.88■□□□□ 0.93
Chmp7Q8R1T1 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC20.88■□□□□ 0.93
Chmp7Q8R1T1 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC20.88■□□□□ 0.93
Chmp7Q8R1T1 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC20.88■□□□□ 0.93
Chmp7Q8R1T1 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Chmp7Q8R1T1 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC20.88■□□□□ 0.93
Chmp7Q8R1T1 Gm9172-201ENSMUST00000212092 954 ntBASIC20.88■□□□□ 0.93
Chmp7Q8R1T1 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Chmp7Q8R1T1 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Chmp7Q8R1T1 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Chmp7Q8R1T1 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Chmp7Q8R1T1 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Chmp7Q8R1T1 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Chmp7Q8R1T1 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Chmp7Q8R1T1 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Chmp7Q8R1T1 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Chmp7Q8R1T1 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Chmp7Q8R1T1 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Chmp7Q8R1T1 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Chmp7Q8R1T1 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Chmp7Q8R1T1 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC20.87■□□□□ 0.93
Chmp7Q8R1T1 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC20.87■□□□□ 0.93
Chmp7Q8R1T1 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Chmp7Q8R1T1 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC20.87■□□□□ 0.93
Chmp7Q8R1T1 Gm8655-201ENSMUST00000221159 852 ntBASIC20.87■□□□□ 0.93
Chmp7Q8R1T1 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms