Protein–RNA interactions for Protein: Q8R1J3

Zcchc9, Zinc finger CCHC domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc9Q8R1J3 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Zcchc9Q8R1J3 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Zcchc9Q8R1J3 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Zcchc9Q8R1J3 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Zcchc9Q8R1J3 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC16.3■□□□□ 0.2
Zcchc9Q8R1J3 Gm16401-202ENSMUST00000197463 2074 ntBASIC16.3■□□□□ 0.2
Zcchc9Q8R1J3 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Zcchc9Q8R1J3 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Zcchc9Q8R1J3 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Zcchc9Q8R1J3 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Zcchc9Q8R1J3 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Zcchc9Q8R1J3 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Zcchc9Q8R1J3 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Zcchc9Q8R1J3 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Zcchc9Q8R1J3 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC16.3■□□□□ 0.2
Zcchc9Q8R1J3 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Zcchc9Q8R1J3 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Zcchc9Q8R1J3 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC16.3■□□□□ 0.2
Zcchc9Q8R1J3 AW822252-206ENSMUST00000208904 237 ntBASIC16.3■□□□□ 0.2
Zcchc9Q8R1J3 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Zcchc9Q8R1J3 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Zcchc9Q8R1J3 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Zcchc9Q8R1J3 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
Zcchc9Q8R1J3 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Zcchc9Q8R1J3 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Zcchc9Q8R1J3 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Zcchc9Q8R1J3 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC16.29■□□□□ 0.2
Zcchc9Q8R1J3 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Zcchc9Q8R1J3 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Zcchc9Q8R1J3 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Zcchc9Q8R1J3 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
Zcchc9Q8R1J3 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Zcchc9Q8R1J3 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Zcchc9Q8R1J3 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Zcchc9Q8R1J3 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Zcchc9Q8R1J3 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Zcchc9Q8R1J3 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Zcchc9Q8R1J3 Gm13216-201ENSMUST00000117145 591 ntBASIC16.29■□□□□ 0.2
Zcchc9Q8R1J3 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Zcchc9Q8R1J3 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Zcchc9Q8R1J3 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC16.29■□□□□ 0.2
Zcchc9Q8R1J3 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Zcchc9Q8R1J3 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Zcchc9Q8R1J3 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Zcchc9Q8R1J3 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Zcchc9Q8R1J3 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Zcchc9Q8R1J3 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Zcchc9Q8R1J3 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Zcchc9Q8R1J3 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Zcchc9Q8R1J3 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Zcchc9Q8R1J3 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Zcchc9Q8R1J3 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Zcchc9Q8R1J3 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC16.28■□□□□ 0.2
Zcchc9Q8R1J3 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Zcchc9Q8R1J3 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Zcchc9Q8R1J3 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Zcchc9Q8R1J3 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Zcchc9Q8R1J3 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Zcchc9Q8R1J3 Gm9867-201ENSMUST00000192212 2647 ntBASIC16.28■□□□□ 0.2
Zcchc9Q8R1J3 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Zcchc9Q8R1J3 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
Zcchc9Q8R1J3 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Zcchc9Q8R1J3 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC16.28■□□□□ 0.2
Zcchc9Q8R1J3 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Zcchc9Q8R1J3 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Zcchc9Q8R1J3 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Zcchc9Q8R1J3 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC16.28■□□□□ 0.2
Zcchc9Q8R1J3 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC16.28■□□□□ 0.2
Zcchc9Q8R1J3 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC16.28■□□□□ 0.2
Zcchc9Q8R1J3 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC16.28■□□□□ 0.2
Zcchc9Q8R1J3 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC16.28■□□□□ 0.2
Zcchc9Q8R1J3 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Zcchc9Q8R1J3 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Zcchc9Q8R1J3 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Zcchc9Q8R1J3 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Zcchc9Q8R1J3 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Zcchc9Q8R1J3 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Zcchc9Q8R1J3 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Zcchc9Q8R1J3 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Zcchc9Q8R1J3 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Zcchc9Q8R1J3 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Zcchc9Q8R1J3 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC16.27■□□□□ 0.2
Zcchc9Q8R1J3 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Zcchc9Q8R1J3 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Zcchc9Q8R1J3 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Zcchc9Q8R1J3 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Zcchc9Q8R1J3 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Zcchc9Q8R1J3 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Zcchc9Q8R1J3 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Zcchc9Q8R1J3 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Zcchc9Q8R1J3 Gm12644-201ENSMUST00000119935 606 ntBASIC16.27■□□□□ 0.2
Zcchc9Q8R1J3 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
Zcchc9Q8R1J3 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Zcchc9Q8R1J3 Gm18733-201ENSMUST00000173950 856 ntBASIC16.27■□□□□ 0.2
Zcchc9Q8R1J3 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC16.27■□□□□ 0.2
Zcchc9Q8R1J3 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC16.27■□□□□ 0.2
Zcchc9Q8R1J3 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC16.27■□□□□ 0.2
Zcchc9Q8R1J3 Gm5867-201ENSMUST00000063197 592 ntBASIC16.27■□□□□ 0.2
Zcchc9Q8R1J3 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Zcchc9Q8R1J3 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms